Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a2Q64739 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
Col11a2Q64739 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a2Q64739 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a2Q64739 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a2Q64739 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a2Q64739 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a2Q64739 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a2Q64739 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a2Q64739 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a2Q64739 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a2Q64739 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Col11a2Q64739 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a2Q64739 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a2Q64739 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a2Q64739 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a2Q64739 Gm14395-201ENSMUST00000120494 563 ntBASIC14.58□□□□□ -0.08
Col11a2Q64739 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a2Q64739 Gm24809-201ENSMUST00000175318 271 ntBASIC14.58□□□□□ -0.08
Col11a2Q64739 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC14.58□□□□□ -0.08
Col11a2Q64739 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC14.58□□□□□ -0.08
Col11a2Q64739 Gm37638-201ENSMUST00000194337 1123 ntBASIC14.58□□□□□ -0.08
Col11a2Q64739 Gm42430-201ENSMUST00000197209 616 ntBASIC14.58□□□□□ -0.08
Col11a2Q64739 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.58□□□□□ -0.08
Col11a2Q64739 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a2Q64739 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
Col11a2Q64739 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Col11a2Q64739 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col11a2Q64739 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col11a2Q64739 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col11a2Q64739 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col11a2Q64739 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col11a2Q64739 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col11a2Q64739 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col11a2Q64739 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col11a2Q64739 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col11a2Q64739 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col11a2Q64739 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Col11a2Q64739 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col11a2Q64739 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Col11a2Q64739 Map1b-203ENSMUST00000223725 2669 ntBASIC14.57□□□□□ -0.08
Col11a2Q64739 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col11a2Q64739 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col11a2Q64739 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
Col11a2Q64739 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col11a2Q64739 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col11a2Q64739 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col11a2Q64739 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col11a2Q64739 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Col11a2Q64739 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col11a2Q64739 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.57□□□□□ -0.08
Col11a2Q64739 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col11a2Q64739 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Col11a2Q64739 Gm17709-201ENSMUST00000174536 1096 ntBASIC14.57□□□□□ -0.08
Col11a2Q64739 Gm25998-201ENSMUST00000175397 53 ntBASIC14.57□□□□□ -0.08
Col11a2Q64739 Gm43671-201ENSMUST00000200422 433 ntBASIC14.57□□□□□ -0.08
Col11a2Q64739 Gm43275-201ENSMUST00000202053 1020 ntBASIC14.57□□□□□ -0.08
Col11a2Q64739 Gm44953-201ENSMUST00000208745 1286 ntBASIC14.57□□□□□ -0.08
Col11a2Q64739 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Col11a2Q64739 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.57□□□□□ -0.08
Col11a2Q64739 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Col11a2Q64739 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Col11a2Q64739 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.57□□□□□ -0.08
Col11a2Q64739 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.57□□□□□ -0.08
Col11a2Q64739 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col11a2Q64739 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col11a2Q64739 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col11a2Q64739 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col11a2Q64739 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col11a2Q64739 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col11a2Q64739 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col11a2Q64739 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.56□□□□□ -0.08
Col11a2Q64739 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col11a2Q64739 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Col11a2Q64739 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col11a2Q64739 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col11a2Q64739 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col11a2Q64739 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col11a2Q64739 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col11a2Q64739 Gm11560-201ENSMUST00000117567 948 ntBASIC14.56□□□□□ -0.08
Col11a2Q64739 Gm11500-201ENSMUST00000118237 601 ntBASIC14.56□□□□□ -0.08
Col11a2Q64739 Gm14270-201ENSMUST00000118388 846 ntBASIC14.56□□□□□ -0.08
Col11a2Q64739 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC14.56□□□□□ -0.08
Col11a2Q64739 Mir6941-201ENSMUST00000184711 59 ntBASIC14.56□□□□□ -0.08
Col11a2Q64739 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col11a2Q64739 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col11a2Q64739 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC14.56□□□□□ -0.08
Col11a2Q64739 AC158392.3-201ENSMUST00000224271 1284 ntBASIC14.56□□□□□ -0.08
Col11a2Q64739 AC158388.3-202ENSMUST00000225517 775 ntBASIC14.56□□□□□ -0.08
Col11a2Q64739 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col11a2Q64739 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.56□□□□□ -0.08
Col11a2Q64739 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col11a2Q64739 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col11a2Q64739 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.56□□□□□ -0.08
Col11a2Q64739 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col11a2Q64739 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col11a2Q64739 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col11a2Q64739 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col11a2Q64739 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col11a2Q64739 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms