Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.15□□□□□ -0.46
VclQ64727 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.15□□□□□ -0.46
VclQ64727 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VclQ64727 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VclQ64727 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VclQ64727 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
VclQ64727 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
VclQ64727 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VclQ64727 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
VclQ64727 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
VclQ64727 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
VclQ64727 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
VclQ64727 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VclQ64727 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VclQ64727 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VclQ64727 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
VclQ64727 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.47
VclQ64727 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.14□□□□□ -0.47
VclQ64727 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
VclQ64727 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
VclQ64727 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
VclQ64727 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
VclQ64727 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VclQ64727 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
VclQ64727 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VclQ64727 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VclQ64727 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
VclQ64727 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VclQ64727 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VclQ64727 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
VclQ64727 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VclQ64727 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VclQ64727 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.14□□□□□ -0.47
VclQ64727 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VclQ64727 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VclQ64727 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VclQ64727 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VclQ64727 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.14□□□□□ -0.47
VclQ64727 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.14□□□□□ -0.47
VclQ64727 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.14□□□□□ -0.47
VclQ64727 Gm9022-201ENSMUST00000182482 992 ntBASIC12.14□□□□□ -0.47
VclQ64727 Gm18304-201ENSMUST00000189162 546 ntBASIC12.14□□□□□ -0.47
VclQ64727 Gm37259-201ENSMUST00000193903 849 ntBASIC12.14□□□□□ -0.47
VclQ64727 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.14□□□□□ -0.47
VclQ64727 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
VclQ64727 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
VclQ64727 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VclQ64727 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VclQ64727 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
VclQ64727 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
VclQ64727 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
VclQ64727 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
VclQ64727 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.14□□□□□ -0.47
VclQ64727 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VclQ64727 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VclQ64727 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
VclQ64727 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.14□□□□□ -0.47
VclQ64727 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VclQ64727 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.14□□□□□ -0.47
VclQ64727 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.14□□□□□ -0.47
VclQ64727 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VclQ64727 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.14□□□□□ -0.47
VclQ64727 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.14□□□□□ -0.47
VclQ64727 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.14□□□□□ -0.47
VclQ64727 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VclQ64727 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VclQ64727 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VclQ64727 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.13□□□□□ -0.47
VclQ64727 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.13□□□□□ -0.47
VclQ64727 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VclQ64727 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VclQ64727 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.13□□□□□ -0.47
VclQ64727 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
VclQ64727 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VclQ64727 Gm22323-201ENSMUST00000103832 109 ntBASIC12.13□□□□□ -0.47
VclQ64727 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
VclQ64727 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
VclQ64727 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
VclQ64727 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VclQ64727 Gm15276-201ENSMUST00000145953 498 ntBASIC12.13□□□□□ -0.47
VclQ64727 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.13□□□□□ -0.47
VclQ64727 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
VclQ64727 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.13□□□□□ -0.47
VclQ64727 Gm13097-201ENSMUST00000210722 397 ntBASIC12.13□□□□□ -0.47
VclQ64727 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.13□□□□□ -0.47
VclQ64727 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VclQ64727 Gm24136-201ENSMUST00000083374 165 ntBASIC12.13□□□□□ -0.47
VclQ64727 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.13□□□□□ -0.47
VclQ64727 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VclQ64727 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.13□□□□□ -0.47
VclQ64727 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VclQ64727 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VclQ64727 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VclQ64727 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VclQ64727 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VclQ64727 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VclQ64727 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VclQ64727 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
VclQ64727 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VclQ64727 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms