Protein–RNA interactions for Protein: Q64287

Irf4, Interferon regulatory factor 4, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf4Q64287 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.11□□□□□ -0.47
Irf4Q64287 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.11□□□□□ -0.47
Irf4Q64287 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Irf4Q64287 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Irf4Q64287 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.11□□□□□ -0.47
Irf4Q64287 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Irf4Q64287 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Irf4Q64287 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Irf4Q64287 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Irf4Q64287 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Irf4Q64287 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Irf4Q64287 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Irf4Q64287 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Irf4Q64287 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Irf4Q64287 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Irf4Q64287 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Irf4Q64287 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Irf4Q64287 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.11□□□□□ -0.47
Irf4Q64287 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.1□□□□□ -0.47
Irf4Q64287 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Irf4Q64287 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Irf4Q64287 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Irf4Q64287 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Irf4Q64287 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.1□□□□□ -0.47
Irf4Q64287 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Irf4Q64287 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Irf4Q64287 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Irf4Q64287 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Irf4Q64287 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Irf4Q64287 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Irf4Q64287 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Irf4Q64287 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.1□□□□□ -0.47
Irf4Q64287 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Irf4Q64287 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.1□□□□□ -0.47
Irf4Q64287 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.1□□□□□ -0.47
Irf4Q64287 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.1□□□□□ -0.47
Irf4Q64287 Mir7070-201ENSMUST00000183657 86 ntBASIC12.1□□□□□ -0.47
Irf4Q64287 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.1□□□□□ -0.47
Irf4Q64287 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.1□□□□□ -0.47
Irf4Q64287 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.1□□□□□ -0.47
Irf4Q64287 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.1□□□□□ -0.47
Irf4Q64287 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.1□□□□□ -0.47
Irf4Q64287 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Irf4Q64287 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Irf4Q64287 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Irf4Q64287 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Irf4Q64287 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Irf4Q64287 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Irf4Q64287 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Irf4Q64287 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
Irf4Q64287 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Irf4Q64287 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Irf4Q64287 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Irf4Q64287 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.1□□□□□ -0.47
Irf4Q64287 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Irf4Q64287 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Irf4Q64287 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Irf4Q64287 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Irf4Q64287 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Irf4Q64287 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Irf4Q64287 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Irf4Q64287 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Irf4Q64287 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Irf4Q64287 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Irf4Q64287 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.09□□□□□ -0.47
Irf4Q64287 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Irf4Q64287 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Irf4Q64287 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Irf4Q64287 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Irf4Q64287 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Irf4Q64287 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.09□□□□□ -0.47
Irf4Q64287 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.09□□□□□ -0.47
Irf4Q64287 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Irf4Q64287 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Irf4Q64287 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.09□□□□□ -0.47
Irf4Q64287 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.09□□□□□ -0.47
Irf4Q64287 Gm26461-201ENSMUST00000175064 290 ntBASIC12.09□□□□□ -0.47
Irf4Q64287 Gm28450-201ENSMUST00000187349 638 ntBASIC12.09□□□□□ -0.47
Irf4Q64287 Gm7003-201ENSMUST00000195089 312 ntBASIC12.09□□□□□ -0.47
Irf4Q64287 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Irf4Q64287 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Irf4Q64287 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.09□□□□□ -0.47
Irf4Q64287 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Irf4Q64287 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Irf4Q64287 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Irf4Q64287 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Irf4Q64287 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.09□□□□□ -0.47
Irf4Q64287 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Irf4Q64287 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Irf4Q64287 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Irf4Q64287 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Irf4Q64287 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Irf4Q64287 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Irf4Q64287 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Irf4Q64287 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Irf4Q64287 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.08□□□□□ -0.47
Irf4Q64287 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.47
Irf4Q64287 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.08□□□□□ -0.48
Irf4Q64287 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Irf4Q64287 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms