Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
SspnQ62147 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
SspnQ62147 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SspnQ62147 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SspnQ62147 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SspnQ62147 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
SspnQ62147 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
SspnQ62147 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SspnQ62147 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
SspnQ62147 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SspnQ62147 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SspnQ62147 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SspnQ62147 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
SspnQ62147 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SspnQ62147 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SspnQ62147 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
SspnQ62147 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SspnQ62147 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SspnQ62147 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.36□□□□□ -0.75
SspnQ62147 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.36□□□□□ -0.75
SspnQ62147 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SspnQ62147 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
SspnQ62147 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SspnQ62147 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC10.36□□□□□ -0.75
SspnQ62147 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SspnQ62147 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SspnQ62147 Gm7561-201ENSMUST00000211203 886 ntBASIC10.36□□□□□ -0.75
SspnQ62147 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SspnQ62147 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SspnQ62147 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SspnQ62147 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SspnQ62147 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
SspnQ62147 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
SspnQ62147 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
SspnQ62147 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SspnQ62147 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
SspnQ62147 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
SspnQ62147 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SspnQ62147 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SspnQ62147 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SspnQ62147 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SspnQ62147 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.36□□□□□ -0.75
SspnQ62147 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
SspnQ62147 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SspnQ62147 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SspnQ62147 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
SspnQ62147 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.36□□□□□ -0.75
SspnQ62147 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SspnQ62147 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
SspnQ62147 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SspnQ62147 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SspnQ62147 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SspnQ62147 Zscan30-202ENSMUST00000224144 1458 ntBASIC10.36□□□□□ -0.75
SspnQ62147 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SspnQ62147 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SspnQ62147 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
SspnQ62147 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SspnQ62147 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SspnQ62147 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SspnQ62147 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
SspnQ62147 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SspnQ62147 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SspnQ62147 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SspnQ62147 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SspnQ62147 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.35□□□□□ -0.75
SspnQ62147 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SspnQ62147 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SspnQ62147 Snord83b-201ENSMUST00000104546 94 ntBASIC10.35□□□□□ -0.75
SspnQ62147 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SspnQ62147 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SspnQ62147 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC10.35□□□□□ -0.75
SspnQ62147 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SspnQ62147 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
SspnQ62147 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC10.35□□□□□ -0.75
SspnQ62147 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC10.35□□□□□ -0.75
SspnQ62147 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SspnQ62147 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
SspnQ62147 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.35□□□□□ -0.75
SspnQ62147 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SspnQ62147 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC10.35□□□□□ -0.75
SspnQ62147 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.35□□□□□ -0.75
SspnQ62147 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC10.35□□□□□ -0.75
SspnQ62147 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.35□□□□□ -0.75
SspnQ62147 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC10.35□□□□□ -0.75
SspnQ62147 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SspnQ62147 AC069562.3-201ENSMUST00000225387 587 ntBASIC10.35□□□□□ -0.75
SspnQ62147 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SspnQ62147 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SspnQ62147 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SspnQ62147 Gm10268-201ENSMUST00000085340 555 ntBASIC10.35□□□□□ -0.75
SspnQ62147 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC10.35□□□□□ -0.75
SspnQ62147 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
SspnQ62147 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.35□□□□□ -0.75
SspnQ62147 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SspnQ62147 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.35□□□□□ -0.75
SspnQ62147 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SspnQ62147 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SspnQ62147 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SspnQ62147 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SspnQ62147 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms