Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ctr9Q62018 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC14.57□□□□□ -0.08
Ctr9Q62018 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.57□□□□□ -0.08
Ctr9Q62018 Gm19994-201ENSMUST00000217086 586 ntBASIC14.57□□□□□ -0.08
Ctr9Q62018 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ctr9Q62018 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ctr9Q62018 Gm9996-201ENSMUST00000070359 913 ntBASIC14.57□□□□□ -0.08
Ctr9Q62018 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Ctr9Q62018 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ctr9Q62018 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC14.57□□□□□ -0.08
Ctr9Q62018 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC14.57□□□□□ -0.08
Ctr9Q62018 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ctr9Q62018 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Ctr9Q62018 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ctr9Q62018 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ctr9Q62018 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ctr9Q62018 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ctr9Q62018 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ctr9Q62018 Gm24934-201ENSMUST00000103764 111 ntBASIC14.56□□□□□ -0.08
Ctr9Q62018 Gm13996-201ENSMUST00000118456 430 ntBASIC14.56□□□□□ -0.08
Ctr9Q62018 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ctr9Q62018 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC14.56□□□□□ -0.08
Ctr9Q62018 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14.56□□□□□ -0.08
Ctr9Q62018 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.56□□□□□ -0.08
Ctr9Q62018 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Ctr9Q62018 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ctr9Q62018 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ctr9Q62018 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ctr9Q62018 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ctr9Q62018 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ctr9Q62018 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ctr9Q62018 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ctr9Q62018 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ctr9Q62018 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Ctr9Q62018 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ctr9Q62018 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.56□□□□□ -0.08
Ctr9Q62018 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ctr9Q62018 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ctr9Q62018 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.56□□□□□ -0.08
Ctr9Q62018 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ctr9Q62018 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Ctr9Q62018 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ctr9Q62018 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ctr9Q62018 Gm45011-201ENSMUST00000207620 2297 ntBASIC14.55□□□□□ -0.08
Ctr9Q62018 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ctr9Q62018 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ctr9Q62018 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ctr9Q62018 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ctr9Q62018 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Ctr9Q62018 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ctr9Q62018 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ctr9Q62018 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Ctr9Q62018 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC14.55□□□□□ -0.08
Ctr9Q62018 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ctr9Q62018 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ctr9Q62018 Gm2260-201ENSMUST00000184965 657 ntBASIC14.55□□□□□ -0.08
Ctr9Q62018 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC14.55□□□□□ -0.08
Ctr9Q62018 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC14.55□□□□□ -0.08
Ctr9Q62018 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ctr9Q62018 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ctr9Q62018 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Ctr9Q62018 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ctr9Q62018 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ctr9Q62018 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ctr9Q62018 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ctr9Q62018 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ctr9Q62018 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ctr9Q62018 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ctr9Q62018 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ctr9Q62018 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
Ctr9Q62018 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ctr9Q62018 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ctr9Q62018 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ctr9Q62018 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ctr9Q62018 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.54□□□□□ -0.08
Ctr9Q62018 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Ctr9Q62018 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ctr9Q62018 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ctr9Q62018 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ctr9Q62018 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ctr9Q62018 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
Ctr9Q62018 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC14.54□□□□□ -0.08
Ctr9Q62018 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ctr9Q62018 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ctr9Q62018 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Ctr9Q62018 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ctr9Q62018 Gm13296-201ENSMUST00000117854 997 ntBASIC14.54□□□□□ -0.08
Ctr9Q62018 Gm14208-201ENSMUST00000119645 678 ntBASIC14.54□□□□□ -0.08
Ctr9Q62018 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.54□□□□□ -0.08
Ctr9Q62018 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Ctr9Q62018 Gm24990-201ENSMUST00000157406 323 ntBASIC14.54□□□□□ -0.08
Ctr9Q62018 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC14.54□□□□□ -0.08
Ctr9Q62018 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ctr9Q62018 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ctr9Q62018 Gm32999-201ENSMUST00000192693 562 ntBASIC14.54□□□□□ -0.08
Ctr9Q62018 Gm19187-201ENSMUST00000206781 892 ntBASIC14.54□□□□□ -0.08
Ctr9Q62018 Gm8913-201ENSMUST00000209491 641 ntBASIC14.54□□□□□ -0.08
Ctr9Q62018 Gm45598-202ENSMUST00000210719 986 ntBASIC14.54□□□□□ -0.08
Ctr9Q62018 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ctr9Q62018 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms