Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gli3Q61602 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gli3Q61602 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Gli3Q61602 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gli3Q61602 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Gli3Q61602 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gli3Q61602 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gli3Q61602 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gli3Q61602 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Gli3Q61602 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.16■□□□□ 0.18
Gli3Q61602 Gm23132-201ENSMUST00000104254 132 ntBASIC16.16■□□□□ 0.18
Gli3Q61602 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC16.16■□□□□ 0.18
Gli3Q61602 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC16.16■□□□□ 0.18
Gli3Q61602 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Gli3Q61602 Gm15136-201ENSMUST00000120552 533 ntBASIC16.16■□□□□ 0.18
Gli3Q61602 AA623943-201ENSMUST00000121794 354 ntBASIC16.16■□□□□ 0.18
Gli3Q61602 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gli3Q61602 Gm25872-201ENSMUST00000177784 100 ntBASIC16.16■□□□□ 0.18
Gli3Q61602 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC16.16■□□□□ 0.18
Gli3Q61602 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gli3Q61602 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Gli3Q61602 AC164556.1-201ENSMUST00000221318 751 ntBASIC16.16■□□□□ 0.18
Gli3Q61602 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gli3Q61602 Gm5468-202ENSMUST00000227851 682 ntBASIC16.16■□□□□ 0.18
Gli3Q61602 AC137871.1-201ENSMUST00000228278 475 ntBASIC16.16■□□□□ 0.18
Gli3Q61602 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gli3Q61602 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Gli3Q61602 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gli3Q61602 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gli3Q61602 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gli3Q61602 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gli3Q61602 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC16.16■□□□□ 0.18
Gli3Q61602 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.16■□□□□ 0.18
Gli3Q61602 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gli3Q61602 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gli3Q61602 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.16■□□□□ 0.18
Gli3Q61602 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC16.16■□□□□ 0.18
Gli3Q61602 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gli3Q61602 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Gli3Q61602 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gli3Q61602 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gli3Q61602 AC022682.1-201ENSMUST00000224624 2023 ntBASIC16.15■□□□□ 0.18
Gli3Q61602 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gli3Q61602 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gli3Q61602 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gli3Q61602 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Gli3Q61602 Gm22937-201ENSMUST00000103954 131 ntBASIC16.15■□□□□ 0.18
Gli3Q61602 Gm15746-201ENSMUST00000120684 1027 ntBASIC16.15■□□□□ 0.18
Gli3Q61602 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC16.15■□□□□ 0.18
Gli3Q61602 Gm9369-201ENSMUST00000196009 733 ntBASIC16.15■□□□□ 0.18
Gli3Q61602 Gm30055-201ENSMUST00000203175 803 ntBASIC16.15■□□□□ 0.18
Gli3Q61602 Gm18256-201ENSMUST00000209087 907 ntBASIC16.15■□□□□ 0.18
Gli3Q61602 AC117769.1-201ENSMUST00000224716 1120 ntBASIC16.15■□□□□ 0.18
Gli3Q61602 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC16.15■□□□□ 0.18
Gli3Q61602 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gli3Q61602 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Gli3Q61602 AC151895.1-201ENSMUST00000219025 1742 ntBASIC16.15■□□□□ 0.18
Gli3Q61602 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC16.15■□□□□ 0.18
Gli3Q61602 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gli3Q61602 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC16.15■□□□□ 0.18
Gli3Q61602 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gli3Q61602 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gli3Q61602 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gli3Q61602 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gli3Q61602 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Gli3Q61602 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Gli3Q61602 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Gli3Q61602 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gli3Q61602 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gli3Q61602 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Gli3Q61602 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC16.14■□□□□ 0.17
Gli3Q61602 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC16.14■□□□□ 0.17
Gli3Q61602 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gli3Q61602 Gm38233-201ENSMUST00000194259 807 ntBASIC16.14■□□□□ 0.17
Gli3Q61602 Gm31274-201ENSMUST00000197356 229 ntBASIC16.14■□□□□ 0.17
Gli3Q61602 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC16.14■□□□□ 0.17
Gli3Q61602 CT025689.1-201ENSMUST00000225214 283 ntBASIC16.14■□□□□ 0.17
Gli3Q61602 AC154213.1-201ENSMUST00000228234 583 ntBASIC16.14■□□□□ 0.17
Gli3Q61602 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gli3Q61602 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gli3Q61602 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gli3Q61602 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gli3Q61602 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC16.14■□□□□ 0.17
Gli3Q61602 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gli3Q61602 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gli3Q61602 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC16.14■□□□□ 0.17
Gli3Q61602 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC16.14■□□□□ 0.17
Gli3Q61602 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Gli3Q61602 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gli3Q61602 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gli3Q61602 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC16.14■□□□□ 0.17
Gli3Q61602 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gli3Q61602 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gli3Q61602 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gli3Q61602 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gli3Q61602 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gli3Q61602 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gli3Q61602 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gli3Q61602 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Gli3Q61602 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms