Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Foxc1Q61572 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Foxc1Q61572 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Foxc1Q61572 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Foxc1Q61572 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Foxc1Q61572 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Foxc1Q61572 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Foxc1Q61572 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Foxc1Q61572 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Foxc1Q61572 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Foxc1Q61572 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Foxc1Q61572 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Foxc1Q61572 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC9.37□□□□□ -0.91
Foxc1Q61572 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Foxc1Q61572 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Foxc1Q61572 AC125108.1-201ENSMUST00000218986 2330 ntBASIC9.37□□□□□ -0.91
Foxc1Q61572 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Foxc1Q61572 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Foxc1Q61572 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Foxc1Q61572 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Foxc1Q61572 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Foxc1Q61572 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Foxc1Q61572 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Foxc1Q61572 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Foxc1Q61572 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Foxc1Q61572 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Foxc1Q61572 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
Foxc1Q61572 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Foxc1Q61572 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Foxc1Q61572 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Foxc1Q61572 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Foxc1Q61572 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Foxc1Q61572 Gm9929-201ENSMUST00000171747 1671 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Foxc1Q61572 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Foxc1Q61572 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Foxc1Q61572 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Foxc1Q61572 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Foxc1Q61572 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Foxc1Q61572 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Foxc1Q61572 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Foxc1Q61572 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Foxc1Q61572 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC9.36□□□□□ -0.91
Foxc1Q61572 Gm12203-201ENSMUST00000118235 598 ntBASIC9.36□□□□□ -0.91
Foxc1Q61572 Gm14417-201ENSMUST00000120036 1074 ntBASIC9.36□□□□□ -0.91
Foxc1Q61572 Gm12209-201ENSMUST00000120089 596 ntBASIC9.36□□□□□ -0.91
Foxc1Q61572 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC9.36□□□□□ -0.91
Foxc1Q61572 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC9.36□□□□□ -0.91
Foxc1Q61572 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC9.36□□□□□ -0.91
Foxc1Q61572 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Foxc1Q61572 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC9.36□□□□□ -0.91
Foxc1Q61572 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC9.36□□□□□ -0.91
Foxc1Q61572 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC9.36□□□□□ -0.91
Foxc1Q61572 Gm6182-201ENSMUST00000156439 1208 ntBASIC9.36□□□□□ -0.91
Foxc1Q61572 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Foxc1Q61572 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Foxc1Q61572 Gm29127-201ENSMUST00000188304 517 ntBASIC9.36□□□□□ -0.91
Foxc1Q61572 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC9.36□□□□□ -0.91
Foxc1Q61572 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC9.36□□□□□ -0.91
Foxc1Q61572 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC9.36□□□□□ -0.91
Foxc1Q61572 Gm43179-201ENSMUST00000198797 275 ntBASIC9.36□□□□□ -0.91
Foxc1Q61572 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC9.36□□□□□ -0.91
Foxc1Q61572 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Foxc1Q61572 Gm29705-201ENSMUST00000212598 474 ntBASIC9.36□□□□□ -0.91
Foxc1Q61572 Gm19885-201ENSMUST00000212853 343 ntBASIC9.36□□□□□ -0.91
Foxc1Q61572 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Foxc1Q61572 AC116797.2-202ENSMUST00000223587 1017 ntBASIC9.36□□□□□ -0.91
Foxc1Q61572 AC154643.1-201ENSMUST00000225643 625 ntBASIC9.36□□□□□ -0.91
Foxc1Q61572 AC126253.1-201ENSMUST00000227974 824 ntBASIC9.36□□□□□ -0.91
Foxc1Q61572 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Foxc1Q61572 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Foxc1Q61572 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Foxc1Q61572 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Foxc1Q61572 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Foxc1Q61572 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Foxc1Q61572 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Foxc1Q61572 Gm8399-201ENSMUST00000082300 1117 ntBASIC9.36□□□□□ -0.91
Foxc1Q61572 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Foxc1Q61572 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Foxc1Q61572 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Foxc1Q61572 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Foxc1Q61572 AC154262.2-201ENSMUST00000224310 2293 ntBASIC9.36□□□□□ -0.91
Foxc1Q61572 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Foxc1Q61572 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC9.36□□□□□ -0.91
Foxc1Q61572 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Foxc1Q61572 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Foxc1Q61572 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Foxc1Q61572 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Foxc1Q61572 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Foxc1Q61572 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Foxc1Q61572 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC9.36□□□□□ -0.91
Foxc1Q61572 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Foxc1Q61572 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Foxc1Q61572 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC9.36□□□□□ -0.91
Foxc1Q61572 Gm5082-203ENSMUST00000221920 1518 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Foxc1Q61572 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Foxc1Q61572 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms