Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd1Q61466 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd1Q61466 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Smarcd1Q61466 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.83□□□□□ -0.35
Smarcd1Q61466 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Smarcd1Q61466 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.83□□□□□ -0.35
Smarcd1Q61466 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Smarcd1Q61466 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Smarcd1Q61466 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Smarcd1Q61466 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd1Q61466 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd1Q61466 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.83□□□□□ -0.36
Smarcd1Q61466 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd1Q61466 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.83□□□□□ -0.36
Smarcd1Q61466 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd1Q61466 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Smarcd1Q61466 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd1Q61466 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.83□□□□□ -0.36
Smarcd1Q61466 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd1Q61466 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd1Q61466 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Smarcd1Q61466 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.83□□□□□ -0.36
Smarcd1Q61466 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd1Q61466 Gm12997-201ENSMUST00000120207 640 ntBASIC12.83□□□□□ -0.36
Smarcd1Q61466 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd1Q61466 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Smarcd1Q61466 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd1Q61466 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
Smarcd1Q61466 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd1Q61466 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd1Q61466 Gm4034-201ENSMUST00000187674 480 ntBASIC12.83□□□□□ -0.36
Smarcd1Q61466 Gm17812-201ENSMUST00000204935 318 ntBASIC12.83□□□□□ -0.36
Smarcd1Q61466 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Smarcd1Q61466 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd1Q61466 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd1Q61466 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd1Q61466 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd1Q61466 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd1Q61466 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd1Q61466 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd1Q61466 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd1Q61466 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd1Q61466 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd1Q61466 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd1Q61466 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd1Q61466 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.83□□□□□ -0.36
Smarcd1Q61466 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd1Q61466 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.82□□□□□ -0.36
Smarcd1Q61466 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd1Q61466 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd1Q61466 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd1Q61466 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd1Q61466 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd1Q61466 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd1Q61466 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd1Q61466 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.82□□□□□ -0.36
Smarcd1Q61466 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd1Q61466 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.82□□□□□ -0.36
Smarcd1Q61466 Rprl1-201ENSMUST00000158050 327 ntBASIC12.82□□□□□ -0.36
Smarcd1Q61466 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd1Q61466 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd1Q61466 Gm45433-201ENSMUST00000209386 247 ntBASIC12.82□□□□□ -0.36
Smarcd1Q61466 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd1Q61466 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd1Q61466 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Smarcd1Q61466 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd1Q61466 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd1Q61466 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Smarcd1Q61466 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd1Q61466 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd1Q61466 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Smarcd1Q61466 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd1Q61466 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd1Q61466 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd1Q61466 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd1Q61466 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd1Q61466 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Smarcd1Q61466 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Smarcd1Q61466 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd1Q61466 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.82□□□□□ -0.36
Smarcd1Q61466 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd1Q61466 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd1Q61466 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd1Q61466 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Smarcd1Q61466 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.81□□□□□ -0.36
Smarcd1Q61466 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd1Q61466 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.81□□□□□ -0.36
Smarcd1Q61466 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd1Q61466 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd1Q61466 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd1Q61466 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd1Q61466 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Smarcd1Q61466 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd1Q61466 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd1Q61466 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.81□□□□□ -0.36
Smarcd1Q61466 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd1Q61466 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd1Q61466 Gm44124-201ENSMUST00000204159 472 ntBASIC12.81□□□□□ -0.36
Smarcd1Q61466 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.81□□□□□ -0.36
Smarcd1Q61466 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms