Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Foxd4Q60688 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Foxd4Q60688 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Foxd4Q60688 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.08□□□□□ -0.32
Foxd4Q60688 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Foxd4Q60688 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Foxd4Q60688 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Foxd4Q60688 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Foxd4Q60688 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC13.08□□□□□ -0.32
Foxd4Q60688 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Foxd4Q60688 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Foxd4Q60688 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Foxd4Q60688 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Foxd4Q60688 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Foxd4Q60688 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Foxd4Q60688 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Foxd4Q60688 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Foxd4Q60688 Matn2-203ENSMUST00000226766 3252 ntBASIC13.07□□□□□ -0.32
Foxd4Q60688 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.07□□□□□ -0.32
Foxd4Q60688 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Foxd4Q60688 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Foxd4Q60688 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Foxd4Q60688 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.07□□□□□ -0.32
Foxd4Q60688 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Foxd4Q60688 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Foxd4Q60688 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Foxd4Q60688 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Foxd4Q60688 Gm12978-201ENSMUST00000121250 522 ntBASIC13.07□□□□□ -0.32
Foxd4Q60688 Gm14905-201ENSMUST00000122351 639 ntBASIC13.07□□□□□ -0.32
Foxd4Q60688 Gm16234-201ENSMUST00000124976 815 ntTSL 5 BASIC13.07□□□□□ -0.32
Foxd4Q60688 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.07□□□□□ -0.32
Foxd4Q60688 Gm15429-201ENSMUST00000151268 798 ntBASIC13.07□□□□□ -0.32
Foxd4Q60688 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Foxd4Q60688 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC13.07□□□□□ -0.32
Foxd4Q60688 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC13.07□□□□□ -0.32
Foxd4Q60688 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Foxd4Q60688 Gm24111-201ENSMUST00000175491 97 ntBASIC13.07□□□□□ -0.32
Foxd4Q60688 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Foxd4Q60688 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Foxd4Q60688 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Foxd4Q60688 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Foxd4Q60688 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Foxd4Q60688 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC13.07□□□□□ -0.32
Foxd4Q60688 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Foxd4Q60688 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Foxd4Q60688 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Foxd4Q60688 Mir7654-201ENSMUST00000185082 70 ntBASIC13.07□□□□□ -0.32
Foxd4Q60688 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Foxd4Q60688 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.07□□□□□ -0.32
Foxd4Q60688 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC13.07□□□□□ -0.32
Foxd4Q60688 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.07□□□□□ -0.32
Foxd4Q60688 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.07□□□□□ -0.32
Foxd4Q60688 Gm42452-201ENSMUST00000199749 617 ntBASIC13.07□□□□□ -0.32
Foxd4Q60688 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.07□□□□□ -0.32
Foxd4Q60688 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.07□□□□□ -0.32
Foxd4Q60688 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.07□□□□□ -0.32
Foxd4Q60688 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Foxd4Q60688 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Foxd4Q60688 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.07□□□□□ -0.32
Foxd4Q60688 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Foxd4Q60688 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Foxd4Q60688 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Foxd4Q60688 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Foxd4Q60688 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Foxd4Q60688 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Foxd4Q60688 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Foxd4Q60688 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Foxd4Q60688 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.07□□□□□ -0.32
Foxd4Q60688 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Foxd4Q60688 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Foxd4Q60688 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Foxd4Q60688 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Foxd4Q60688 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Foxd4Q60688 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC13.07□□□□□ -0.32
Foxd4Q60688 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Foxd4Q60688 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Foxd4Q60688 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Foxd4Q60688 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Foxd4Q60688 AC164426.2-201ENSMUST00000225993 2492 ntBASIC13.06□□□□□ -0.32
Foxd4Q60688 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Foxd4Q60688 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Foxd4Q60688 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Foxd4Q60688 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Foxd4Q60688 Gm18300-201ENSMUST00000192792 1406 ntBASIC13.06□□□□□ -0.32
Foxd4Q60688 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Foxd4Q60688 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Foxd4Q60688 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Foxd4Q60688 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Foxd4Q60688 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.06□□□□□ -0.32
Foxd4Q60688 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Foxd4Q60688 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.06□□□□□ -0.32
Foxd4Q60688 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Foxd4Q60688 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Foxd4Q60688 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Foxd4Q60688 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.06□□□□□ -0.32
Foxd4Q60688 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Foxd4Q60688 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Foxd4Q60688 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.06□□□□□ -0.32
Foxd4Q60688 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Foxd4Q60688 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms