Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Pck2-205ENSMUST00000226352 2784 ntBASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Gm13736-201ENSMUST00000119272 253 ntBASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Gm24548-201ENSMUST00000158650 108 ntBASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Gm27514-201ENSMUST00000183692 110 ntBASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav5d-4Q5R1F6 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.71
Trav5d-4Q5R1F6 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Gm22018-201ENSMUST00000104357 131 ntBASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Gm6023-201ENSMUST00000118217 606 ntBASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Gm18304-201ENSMUST00000189162 546 ntBASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms