Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Rmrp-201ENSMUST00000157463 271 ntBASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 H2-Q3-201ENSMUST00000172583 608 ntBASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Gm42682-201ENSMUST00000198349 1265 ntBASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Gm19287-201ENSMUST00000203190 358 ntBASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Gm270-201ENSMUST00000223010 976 ntBASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Ginm1-202ENSMUST00000065124 300 ntBASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ddx49Q4FZF3 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Ddx49Q4FZF3 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx49Q4FZF3 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx49Q4FZF3 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx49Q4FZF3 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx49Q4FZF3 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx49Q4FZF3 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx49Q4FZF3 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC14.38□□□□□ -0.11
Ddx49Q4FZF3 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx49Q4FZF3 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
Ddx49Q4FZF3 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx49Q4FZF3 Gm12196-201ENSMUST00000120954 262 ntBASIC14.38□□□□□ -0.11
Ddx49Q4FZF3 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Ddx49Q4FZF3 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC14.38□□□□□ -0.11
Ddx49Q4FZF3 Mir7677-201ENSMUST00000184226 67 ntBASIC14.38□□□□□ -0.11
Ddx49Q4FZF3 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC14.38□□□□□ -0.11
Ddx49Q4FZF3 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx49Q4FZF3 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ddx49Q4FZF3 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ddx49Q4FZF3 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.38□□□□□ -0.11
Ddx49Q4FZF3 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.38□□□□□ -0.11
Ddx49Q4FZF3 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Ddx49Q4FZF3 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ddx49Q4FZF3 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx49Q4FZF3 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx49Q4FZF3 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.38□□□□□ -0.11
Ddx49Q4FZF3 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Ddx49Q4FZF3 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx49Q4FZF3 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx49Q4FZF3 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx49Q4FZF3 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx49Q4FZF3 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx49Q4FZF3 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx49Q4FZF3 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ddx49Q4FZF3 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx49Q4FZF3 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ddx49Q4FZF3 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx49Q4FZF3 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.37□□□□□ -0.11
Ddx49Q4FZF3 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx49Q4FZF3 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx49Q4FZF3 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Ddx49Q4FZF3 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx49Q4FZF3 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC14.37□□□□□ -0.11
Ddx49Q4FZF3 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC14.37□□□□□ -0.11
Ddx49Q4FZF3 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC14.37□□□□□ -0.11
Ddx49Q4FZF3 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC14.37□□□□□ -0.11
Ddx49Q4FZF3 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx49Q4FZF3 Gm5733-201ENSMUST00000190232 939 ntBASIC14.37□□□□□ -0.11
Ddx49Q4FZF3 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx49Q4FZF3 Gm4482-201ENSMUST00000200876 742 ntBASIC14.37□□□□□ -0.11
Ddx49Q4FZF3 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC14.37□□□□□ -0.11
Ddx49Q4FZF3 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC14.37□□□□□ -0.11
Ddx49Q4FZF3 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC14.37□□□□□ -0.11
Ddx49Q4FZF3 CT025551.1-201ENSMUST00000223996 692 ntBASIC14.37□□□□□ -0.11
Ddx49Q4FZF3 CT030637.1-201ENSMUST00000228016 669 ntBASIC14.37□□□□□ -0.11
Ddx49Q4FZF3 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx49Q4FZF3 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ddx49Q4FZF3 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx49Q4FZF3 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms