Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Rmrp-201ENSMUST00000157463 271 ntBASIC12.49□□□□□ -0.41
Cnga4Q3UW12 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Cnga4Q3UW12 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.49□□□□□ -0.41
Cnga4Q3UW12 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cnga4Q3UW12 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.49□□□□□ -0.41
Cnga4Q3UW12 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.49□□□□□ -0.41
Cnga4Q3UW12 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cnga4Q3UW12 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cnga4Q3UW12 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.49□□□□□ -0.41
Cnga4Q3UW12 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cnga4Q3UW12 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cnga4Q3UW12 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cnga4Q3UW12 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.49□□□□□ -0.41
Cnga4Q3UW12 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cnga4Q3UW12 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Cnga4Q3UW12 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cnga4Q3UW12 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cnga4Q3UW12 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cnga4Q3UW12 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.49□□□□□ -0.41
Cnga4Q3UW12 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cnga4Q3UW12 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cnga4Q3UW12 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.49□□□□□ -0.41
Cnga4Q3UW12 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cnga4Q3UW12 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cnga4Q3UW12 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cnga4Q3UW12 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cnga4Q3UW12 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.48□□□□□ -0.41
Cnga4Q3UW12 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Cnga4Q3UW12 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cnga4Q3UW12 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Cnga4Q3UW12 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cnga4Q3UW12 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cnga4Q3UW12 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cnga4Q3UW12 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cnga4Q3UW12 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cnga4Q3UW12 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cnga4Q3UW12 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cnga4Q3UW12 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cnga4Q3UW12 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cnga4Q3UW12 Gm17208-201ENSMUST00000168388 535 ntBASIC12.48□□□□□ -0.41
Cnga4Q3UW12 Gm37042-201ENSMUST00000193816 581 ntBASIC12.48□□□□□ -0.41
Cnga4Q3UW12 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.48□□□□□ -0.41
Cnga4Q3UW12 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.48□□□□□ -0.41
Cnga4Q3UW12 Gm24136-201ENSMUST00000083374 165 ntBASIC12.48□□□□□ -0.41
Cnga4Q3UW12 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cnga4Q3UW12 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cnga4Q3UW12 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cnga4Q3UW12 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.48□□□□□ -0.41
Cnga4Q3UW12 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.48□□□□□ -0.41
Cnga4Q3UW12 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cnga4Q3UW12 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cnga4Q3UW12 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.48□□□□□ -0.41
Cnga4Q3UW12 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cnga4Q3UW12 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.48□□□□□ -0.41
Cnga4Q3UW12 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cnga4Q3UW12 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.48□□□□□ -0.41
Cnga4Q3UW12 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.48□□□□□ -0.41
Cnga4Q3UW12 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cnga4Q3UW12 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cnga4Q3UW12 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cnga4Q3UW12 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cnga4Q3UW12 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cnga4Q3UW12 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.47□□□□□ -0.41
Cnga4Q3UW12 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cnga4Q3UW12 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.47□□□□□ -0.41
Cnga4Q3UW12 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cnga4Q3UW12 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
Cnga4Q3UW12 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cnga4Q3UW12 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cnga4Q3UW12 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.47□□□□□ -0.41
Cnga4Q3UW12 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.47□□□□□ -0.41
Cnga4Q3UW12 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.47□□□□□ -0.41
Cnga4Q3UW12 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.47□□□□□ -0.41
Cnga4Q3UW12 Gm4034-201ENSMUST00000187674 480 ntBASIC12.47□□□□□ -0.41
Cnga4Q3UW12 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.47□□□□□ -0.41
Cnga4Q3UW12 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.47□□□□□ -0.41
Cnga4Q3UW12 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.47□□□□□ -0.41
Cnga4Q3UW12 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cnga4Q3UW12 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.47□□□□□ -0.41
Cnga4Q3UW12 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Cnga4Q3UW12 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cnga4Q3UW12 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cnga4Q3UW12 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cnga4Q3UW12 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cnga4Q3UW12 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.47□□□□□ -0.41
Cnga4Q3UW12 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cnga4Q3UW12 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cnga4Q3UW12 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cnga4Q3UW12 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.47□□□□□ -0.41
Cnga4Q3UW12 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Cnga4Q3UW12 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.46□□□□□ -0.41
Cnga4Q3UW12 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Cnga4Q3UW12 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cnga4Q3UW12 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.46□□□□□ -0.41
Cnga4Q3UW12 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cnga4Q3UW12 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Cnga4Q3UW12 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cnga4Q3UW12 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cnga4Q3UW12 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Cnga4Q3UW12 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms