Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Gm14381-201ENSMUST00000122105 414 ntBASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Gm27046-201ENSMUST00000182160 463 ntBASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.31□□□□□ -0.6
Nhlrc4Q3UP44 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Rubie-203ENSMUST00000227803 2430 ntBASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Gm17376-201ENSMUST00000166016 84 ntBASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Gm20482-202ENSMUST00000174729 825 ntBASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Gm5070-201ENSMUST00000177599 862 ntBASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Gzmn-202ENSMUST00000225535 989 ntBASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.3□□□□□ -0.6
Nhlrc4Q3UP44 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.29□□□□□ -0.6
Nhlrc4Q3UP44 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nhlrc4Q3UP44 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Nhlrc4Q3UP44 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Nhlrc4Q3UP44 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Nhlrc4Q3UP44 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Nhlrc4Q3UP44 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.29□□□□□ -0.6
Nhlrc4Q3UP44 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nhlrc4Q3UP44 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nhlrc4Q3UP44 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms