Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Gm15460-201ENSMUST00000118147 391 ntBASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Gm27437-201ENSMUST00000183429 107 ntBASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Gm21039-201ENSMUST00000223359 2012 ntBASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Ccdc116-202ENSMUST00000115709 1900 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Nit1-201ENSMUST00000111289 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Mapkap1-203ENSMUST00000113126 3018 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccbe1Q3MI99 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 Gm6415-201ENSMUST00000118488 348 ntBASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 Gm13813-201ENSMUST00000120998 787 ntBASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 Gm27989-201ENSMUST00000184721 107 ntBASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 AC131710.1-201ENSMUST00000228336 990 ntBASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 1700001J11Rik-202ENSMUST00000190330 2463 ntBASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccbe1Q3MI99 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Ccbe1Q3MI99 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms