Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.13□□□□□ -0.31
Nhej1Q3KNJ2 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nhej1Q3KNJ2 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.13□□□□□ -0.31
Nhej1Q3KNJ2 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.13□□□□□ -0.31
Nhej1Q3KNJ2 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.13□□□□□ -0.31
Nhej1Q3KNJ2 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nhej1Q3KNJ2 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nhej1Q3KNJ2 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nhej1Q3KNJ2 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.13□□□□□ -0.31
Nhej1Q3KNJ2 Gm45930-201ENSMUST00000221330 292 ntBASIC13.13□□□□□ -0.31
Nhej1Q3KNJ2 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nhej1Q3KNJ2 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
Nhej1Q3KNJ2 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nhej1Q3KNJ2 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nhej1Q3KNJ2 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Nhej1Q3KNJ2 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nhej1Q3KNJ2 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nhej1Q3KNJ2 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Nhej1Q3KNJ2 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nhej1Q3KNJ2 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Nhej1Q3KNJ2 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nhej1Q3KNJ2 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nhej1Q3KNJ2 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nhej1Q3KNJ2 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nhej1Q3KNJ2 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nhej1Q3KNJ2 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nhej1Q3KNJ2 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nhej1Q3KNJ2 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.12□□□□□ -0.31
Nhej1Q3KNJ2 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nhej1Q3KNJ2 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nhej1Q3KNJ2 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Nhej1Q3KNJ2 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Nhej1Q3KNJ2 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nhej1Q3KNJ2 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nhej1Q3KNJ2 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nhej1Q3KNJ2 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Nhej1Q3KNJ2 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nhej1Q3KNJ2 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nhej1Q3KNJ2 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nhej1Q3KNJ2 Gm9083-201ENSMUST00000120423 819 ntBASIC13.12□□□□□ -0.31
Nhej1Q3KNJ2 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nhej1Q3KNJ2 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.12□□□□□ -0.31
Nhej1Q3KNJ2 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nhej1Q3KNJ2 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nhej1Q3KNJ2 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Nhej1Q3KNJ2 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nhej1Q3KNJ2 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nhej1Q3KNJ2 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nhej1Q3KNJ2 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nhej1Q3KNJ2 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Nhej1Q3KNJ2 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Nhej1Q3KNJ2 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nhej1Q3KNJ2 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.12□□□□□ -0.31
Nhej1Q3KNJ2 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nhej1Q3KNJ2 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.12□□□□□ -0.31
Nhej1Q3KNJ2 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Nhej1Q3KNJ2 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nhej1Q3KNJ2 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.12□□□□□ -0.31
Nhej1Q3KNJ2 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Nhej1Q3KNJ2 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nhej1Q3KNJ2 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Nhej1Q3KNJ2 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 Gm12138-201ENSMUST00000122180 951 ntBASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 Gm29649-201ENSMUST00000185649 419 ntBASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 Gm7561-201ENSMUST00000211203 886 ntBASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 Gm10268-201ENSMUST00000085340 555 ntBASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nhej1Q3KNJ2 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms