Protein–RNA interactions for Protein: Q0PD08

Rab42, Ras-related protein Rab-42, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab42Q0PD08 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rab42Q0PD08 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rab42Q0PD08 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Gm6092-201ENSMUST00000121659 2029 ntBASIC10.94□□□□□ -0.66
Rab42Q0PD08 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Gm5687-201ENSMUST00000118252 640 ntBASIC10.94□□□□□ -0.66
Rab42Q0PD08 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Rab42Q0PD08 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Gm8227-201ENSMUST00000223306 571 ntBASIC10.94□□□□□ -0.66
Rab42Q0PD08 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.94□□□□□ -0.66
Rab42Q0PD08 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Rab42Q0PD08 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab42Q0PD08 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rab42Q0PD08 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rab42Q0PD08 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.93□□□□□ -0.66
Rab42Q0PD08 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC10.93□□□□□ -0.66
Rab42Q0PD08 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rab42Q0PD08 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Rab42Q0PD08 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rab42Q0PD08 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Rab42Q0PD08 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rab42Q0PD08 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rab42Q0PD08 Gm26660-202ENSMUST00000223620 4112 ntBASIC10.93□□□□□ -0.66
Rab42Q0PD08 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rab42Q0PD08 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rab42Q0PD08 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC10.93□□□□□ -0.66
Rab42Q0PD08 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rab42Q0PD08 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rab42Q0PD08 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rab42Q0PD08 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rab42Q0PD08 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rab42Q0PD08 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rab42Q0PD08 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rab42Q0PD08 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC10.93□□□□□ -0.66
Rab42Q0PD08 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10.93□□□□□ -0.66
Rab42Q0PD08 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rab42Q0PD08 Gm27701-201ENSMUST00000184498 110 ntBASIC10.93□□□□□ -0.66
Rab42Q0PD08 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.93□□□□□ -0.66
Rab42Q0PD08 AC155252.1-201ENSMUST00000226462 1208 ntBASIC10.93□□□□□ -0.66
Rab42Q0PD08 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rab42Q0PD08 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rab42Q0PD08 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Rab42Q0PD08 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Rab42Q0PD08 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rab42Q0PD08 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rab42Q0PD08 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rab42Q0PD08 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms