Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ebf1Q07802 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf1Q07802 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.53□□□□□ -0.4
Ebf1Q07802 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ebf1Q07802 Gm28882-201ENSMUST00000185504 314 ntBASIC12.53□□□□□ -0.4
Ebf1Q07802 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf1Q07802 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.53□□□□□ -0.4
Ebf1Q07802 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.53□□□□□ -0.4
Ebf1Q07802 Gm45118-201ENSMUST00000208928 825 ntBASIC12.53□□□□□ -0.4
Ebf1Q07802 Gm45598-202ENSMUST00000210719 986 ntBASIC12.53□□□□□ -0.4
Ebf1Q07802 Gm7848-201ENSMUST00000210739 718 ntBASIC12.53□□□□□ -0.4
Ebf1Q07802 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.53□□□□□ -0.4
Ebf1Q07802 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf1Q07802 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf1Q07802 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.53□□□□□ -0.4
Ebf1Q07802 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf1Q07802 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf1Q07802 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf1Q07802 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ebf1Q07802 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ebf1Q07802 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf1Q07802 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf1Q07802 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf1Q07802 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf1Q07802 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf1Q07802 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ebf1Q07802 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ebf1Q07802 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf1Q07802 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf1Q07802 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf1Q07802 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf1Q07802 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf1Q07802 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.53□□□□□ -0.4
Ebf1Q07802 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf1Q07802 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf1Q07802 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.52□□□□□ -0.4
Ebf1Q07802 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ebf1Q07802 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Ebf1Q07802 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ebf1Q07802 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ebf1Q07802 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Ebf1Q07802 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ebf1Q07802 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ebf1Q07802 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ebf1Q07802 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf1Q07802 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf1Q07802 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf1Q07802 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf1Q07802 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf1Q07802 Gm9062-201ENSMUST00000117712 727 ntBASIC12.52□□□□□ -0.41
Ebf1Q07802 Gm15782-201ENSMUST00000121073 445 ntBASIC12.52□□□□□ -0.41
Ebf1Q07802 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.52□□□□□ -0.41
Ebf1Q07802 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf1Q07802 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.52□□□□□ -0.41
Ebf1Q07802 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.52□□□□□ -0.41
Ebf1Q07802 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf1Q07802 Gm18734-201ENSMUST00000172937 808 ntBASIC12.52□□□□□ -0.41
Ebf1Q07802 Gm9211-201ENSMUST00000182882 975 ntBASIC12.52□□□□□ -0.41
Ebf1Q07802 Gm7467-201ENSMUST00000185173 652 ntBASIC12.52□□□□□ -0.41
Ebf1Q07802 Gm37666-201ENSMUST00000194110 866 ntBASIC12.52□□□□□ -0.41
Ebf1Q07802 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.52□□□□□ -0.41
Ebf1Q07802 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.52□□□□□ -0.41
Ebf1Q07802 Gm19187-201ENSMUST00000206781 892 ntBASIC12.52□□□□□ -0.41
Ebf1Q07802 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.52□□□□□ -0.41
Ebf1Q07802 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.52□□□□□ -0.41
Ebf1Q07802 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf1Q07802 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf1Q07802 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ebf1Q07802 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ebf1Q07802 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf1Q07802 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.52□□□□□ -0.41
Ebf1Q07802 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.52□□□□□ -0.41
Ebf1Q07802 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf1Q07802 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf1Q07802 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf1Q07802 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf1Q07802 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf1Q07802 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ebf1Q07802 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf1Q07802 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf1Q07802 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Ebf1Q07802 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf1Q07802 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ebf1Q07802 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ebf1Q07802 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf1Q07802 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf1Q07802 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf1Q07802 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf1Q07802 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf1Q07802 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf1Q07802 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf1Q07802 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf1Q07802 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Ebf1Q07802 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf1Q07802 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf1Q07802 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf1Q07802 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ebf1Q07802 Gm13611-201ENSMUST00000118269 318 ntBASIC12.51□□□□□ -0.41
Ebf1Q07802 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf1Q07802 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms