Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a2Q07643 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a2Q07643 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Col9a2Q07643 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a2Q07643 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a2Q07643 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Col9a2Q07643 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Col9a2Q07643 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col9a2Q07643 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Col9a2Q07643 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col9a2Q07643 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col9a2Q07643 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col9a2Q07643 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.32□□□□□ -0.28
Col9a2Q07643 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.32□□□□□ -0.28
Col9a2Q07643 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col9a2Q07643 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Col9a2Q07643 Gm22133-201ENSMUST00000102082 109 ntBASIC13.32□□□□□ -0.28
Col9a2Q07643 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Col9a2Q07643 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
Col9a2Q07643 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.32□□□□□ -0.28
Col9a2Q07643 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC13.32□□□□□ -0.28
Col9a2Q07643 Gm6506-201ENSMUST00000119775 1136 ntBASIC13.32□□□□□ -0.28
Col9a2Q07643 Gm14247-201ENSMUST00000120950 237 ntBASIC13.32□□□□□ -0.28
Col9a2Q07643 Gm11450-201ENSMUST00000121144 333 ntBASIC13.32□□□□□ -0.28
Col9a2Q07643 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col9a2Q07643 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC13.32□□□□□ -0.28
Col9a2Q07643 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Col9a2Q07643 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC13.32□□□□□ -0.28
Col9a2Q07643 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.32□□□□□ -0.28
Col9a2Q07643 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.32□□□□□ -0.28
Col9a2Q07643 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col9a2Q07643 Gm37246-201ENSMUST00000192665 835 ntBASIC13.32□□□□□ -0.28
Col9a2Q07643 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.32□□□□□ -0.28
Col9a2Q07643 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Col9a2Q07643 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col9a2Q07643 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.32□□□□□ -0.28
Col9a2Q07643 Gm17827-201ENSMUST00000211825 742 ntBASIC13.32□□□□□ -0.28
Col9a2Q07643 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC13.32□□□□□ -0.28
Col9a2Q07643 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col9a2Q07643 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col9a2Q07643 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col9a2Q07643 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Col9a2Q07643 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC13.32□□□□□ -0.28
Col9a2Q07643 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col9a2Q07643 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col9a2Q07643 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col9a2Q07643 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.32□□□□□ -0.28
Col9a2Q07643 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col9a2Q07643 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col9a2Q07643 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col9a2Q07643 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Col9a2Q07643 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col9a2Q07643 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col9a2Q07643 AC171277.1-201ENSMUST00000216902 1441 ntBASIC13.31□□□□□ -0.28
Col9a2Q07643 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col9a2Q07643 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col9a2Q07643 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col9a2Q07643 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col9a2Q07643 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col9a2Q07643 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col9a2Q07643 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col9a2Q07643 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col9a2Q07643 Gm12266-201ENSMUST00000120311 962 ntBASIC13.31□□□□□ -0.28
Col9a2Q07643 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.31□□□□□ -0.28
Col9a2Q07643 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col9a2Q07643 Gm6407-201ENSMUST00000176468 549 ntBASIC13.31□□□□□ -0.28
Col9a2Q07643 Gm19353-201ENSMUST00000184561 445 ntBASIC13.31□□□□□ -0.28
Col9a2Q07643 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col9a2Q07643 Gm42682-201ENSMUST00000198349 1265 ntBASIC13.31□□□□□ -0.28
Col9a2Q07643 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col9a2Q07643 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.31□□□□□ -0.28
Col9a2Q07643 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.31□□□□□ -0.28
Col9a2Q07643 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Col9a2Q07643 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col9a2Q07643 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col9a2Q07643 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col9a2Q07643 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col9a2Q07643 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.31□□□□□ -0.28
Col9a2Q07643 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col9a2Q07643 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col9a2Q07643 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col9a2Q07643 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col9a2Q07643 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col9a2Q07643 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col9a2Q07643 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a2Q07643 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a2Q07643 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC13.3□□□□□ -0.28
Col9a2Q07643 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a2Q07643 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a2Q07643 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a2Q07643 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a2Q07643 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a2Q07643 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.3□□□□□ -0.28
Col9a2Q07643 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a2Q07643 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a2Q07643 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a2Q07643 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a2Q07643 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Col9a2Q07643 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC13.3□□□□□ -0.28
Col9a2Q07643 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms