Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
VcpQ01853 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.19□□□□□ -0.3
VcpQ01853 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VcpQ01853 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
VcpQ01853 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VcpQ01853 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
VcpQ01853 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VcpQ01853 Gm11597-201ENSMUST00000121423 964 ntBASIC13.19□□□□□ -0.3
VcpQ01853 Gm12208-201ENSMUST00000122004 163 ntBASIC13.19□□□□□ -0.3
VcpQ01853 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.19□□□□□ -0.3
VcpQ01853 Mir339-201ENSMUST00000083659 96 ntBASIC13.19□□□□□ -0.3
VcpQ01853 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VcpQ01853 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.19□□□□□ -0.3
VcpQ01853 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VcpQ01853 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
VcpQ01853 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VcpQ01853 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VcpQ01853 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VcpQ01853 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VcpQ01853 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VcpQ01853 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VcpQ01853 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VcpQ01853 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VcpQ01853 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VcpQ01853 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
VcpQ01853 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VcpQ01853 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.18□□□□□ -0.3
VcpQ01853 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VcpQ01853 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VcpQ01853 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VcpQ01853 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VcpQ01853 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VcpQ01853 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VcpQ01853 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VcpQ01853 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.18□□□□□ -0.3
VcpQ01853 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
VcpQ01853 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
VcpQ01853 Gm25214-201ENSMUST00000104573 129 ntBASIC13.18□□□□□ -0.3
VcpQ01853 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VcpQ01853 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
VcpQ01853 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VcpQ01853 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
VcpQ01853 Gm11531-201ENSMUST00000117614 555 ntBASIC13.18□□□□□ -0.3
VcpQ01853 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC13.18□□□□□ -0.3
VcpQ01853 Gm26361-201ENSMUST00000158868 186 ntBASIC13.18□□□□□ -0.3
VcpQ01853 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VcpQ01853 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.18□□□□□ -0.3
VcpQ01853 Gm6407-201ENSMUST00000176468 549 ntBASIC13.18□□□□□ -0.3
VcpQ01853 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC13.18□□□□□ -0.3
VcpQ01853 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.18□□□□□ -0.3
VcpQ01853 Gm9211-201ENSMUST00000182882 975 ntBASIC13.18□□□□□ -0.3
VcpQ01853 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.18□□□□□ -0.3
VcpQ01853 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
VcpQ01853 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VcpQ01853 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VcpQ01853 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.18□□□□□ -0.3
VcpQ01853 CT025694.1-201ENSMUST00000226188 934 ntBASIC13.18□□□□□ -0.3
VcpQ01853 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VcpQ01853 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
VcpQ01853 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VcpQ01853 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VcpQ01853 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.18□□□□□ -0.3
VcpQ01853 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.18□□□□□ -0.3
VcpQ01853 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VcpQ01853 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
VcpQ01853 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.18□□□□□ -0.3
VcpQ01853 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VcpQ01853 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
VcpQ01853 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VcpQ01853 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
VcpQ01853 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
VcpQ01853 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcpQ01853 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcpQ01853 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.17□□□□□ -0.3
VcpQ01853 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VcpQ01853 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcpQ01853 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.17□□□□□ -0.3
VcpQ01853 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcpQ01853 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcpQ01853 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcpQ01853 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
VcpQ01853 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcpQ01853 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcpQ01853 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VcpQ01853 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcpQ01853 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcpQ01853 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcpQ01853 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcpQ01853 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
VcpQ01853 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC13.17□□□□□ -0.3
VcpQ01853 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.17□□□□□ -0.3
VcpQ01853 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.17□□□□□ -0.3
VcpQ01853 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VcpQ01853 Gm44136-201ENSMUST00000203819 1106 ntBASIC13.17□□□□□ -0.3
VcpQ01853 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.17□□□□□ -0.3
VcpQ01853 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcpQ01853 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcpQ01853 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcpQ01853 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
VcpQ01853 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms