Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GabpaQ00422 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
GabpaQ00422 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GabpaQ00422 Gm23596-201ENSMUST00000104304 132 ntBASIC13.96□□□□□ -0.17
GabpaQ00422 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
GabpaQ00422 Gm12164-201ENSMUST00000121695 551 ntBASIC13.96□□□□□ -0.17
GabpaQ00422 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
GabpaQ00422 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC13.96□□□□□ -0.17
GabpaQ00422 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GabpaQ00422 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.96□□□□□ -0.17
GabpaQ00422 Mir7677-201ENSMUST00000184226 67 ntBASIC13.96□□□□□ -0.17
GabpaQ00422 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC13.96□□□□□ -0.17
GabpaQ00422 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GabpaQ00422 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GabpaQ00422 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GabpaQ00422 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GabpaQ00422 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GabpaQ00422 Mir219a-1-201ENSMUST00000083621 110 ntBASIC13.96□□□□□ -0.17
GabpaQ00422 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
GabpaQ00422 Gm21811-201ENSMUST00000096485 930 ntBASIC13.96□□□□□ -0.17
GabpaQ00422 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GabpaQ00422 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
GabpaQ00422 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
GabpaQ00422 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GabpaQ00422 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
GabpaQ00422 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
GabpaQ00422 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
GabpaQ00422 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
GabpaQ00422 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
GabpaQ00422 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
GabpaQ00422 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GabpaQ00422 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GabpaQ00422 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
GabpaQ00422 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
GabpaQ00422 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GabpaQ00422 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
GabpaQ00422 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
GabpaQ00422 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GabpaQ00422 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
GabpaQ00422 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GabpaQ00422 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
GabpaQ00422 Gm26286-201ENSMUST00000104166 134 ntBASIC13.95□□□□□ -0.18
GabpaQ00422 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
GabpaQ00422 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
GabpaQ00422 Gm14058-201ENSMUST00000116082 735 ntBASIC13.95□□□□□ -0.18
GabpaQ00422 Gm11941-201ENSMUST00000119904 610 ntBASIC13.95□□□□□ -0.18
GabpaQ00422 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.95□□□□□ -0.18
GabpaQ00422 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
GabpaQ00422 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
GabpaQ00422 Gm24514-201ENSMUST00000174961 285 ntBASIC13.95□□□□□ -0.18
GabpaQ00422 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
GabpaQ00422 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
GabpaQ00422 Gm19353-201ENSMUST00000184561 445 ntBASIC13.95□□□□□ -0.18
GabpaQ00422 Ighv4-2-201ENSMUST00000192975 362 ntBASIC13.95□□□□□ -0.18
GabpaQ00422 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
GabpaQ00422 AC133602.1-201ENSMUST00000227510 509 ntBASIC13.95□□□□□ -0.18
GabpaQ00422 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
GabpaQ00422 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
GabpaQ00422 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GabpaQ00422 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
GabpaQ00422 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GabpaQ00422 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
GabpaQ00422 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.95□□□□□ -0.18
GabpaQ00422 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GabpaQ00422 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GabpaQ00422 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GabpaQ00422 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GabpaQ00422 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GabpaQ00422 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
GabpaQ00422 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
GabpaQ00422 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.95□□□□□ -0.18
GabpaQ00422 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.95□□□□□ -0.18
GabpaQ00422 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GabpaQ00422 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
GabpaQ00422 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
GabpaQ00422 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GabpaQ00422 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.95□□□□□ -0.18
GabpaQ00422 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
GabpaQ00422 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
GabpaQ00422 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.94□□□□□ -0.18
GabpaQ00422 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GabpaQ00422 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.94□□□□□ -0.18
GabpaQ00422 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GabpaQ00422 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
GabpaQ00422 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
GabpaQ00422 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GabpaQ00422 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GabpaQ00422 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
GabpaQ00422 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
GabpaQ00422 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GabpaQ00422 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC13.94□□□□□ -0.18
GabpaQ00422 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC13.94□□□□□ -0.18
GabpaQ00422 Gm12196-201ENSMUST00000120954 262 ntBASIC13.94□□□□□ -0.18
GabpaQ00422 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GabpaQ00422 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.94□□□□□ -0.18
GabpaQ00422 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
GabpaQ00422 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
GabpaQ00422 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
GabpaQ00422 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.94□□□□□ -0.18
GabpaQ00422 Gm9211-201ENSMUST00000182882 975 ntBASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms