Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43bP86448 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43bP86448 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43bP86448 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43bP86448 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.7□□□□□ -0.38
Trim43bP86448 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43bP86448 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trim43bP86448 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim43bP86448 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43bP86448 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.7□□□□□ -0.38
Trim43bP86448 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43bP86448 Gm6458-201ENSMUST00000211573 635 ntBASIC12.7□□□□□ -0.38
Trim43bP86448 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43bP86448 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43bP86448 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trim43bP86448 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Trim43bP86448 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43bP86448 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43bP86448 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43bP86448 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43bP86448 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43bP86448 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43bP86448 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43bP86448 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trim43bP86448 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43bP86448 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Trim43bP86448 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43bP86448 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43bP86448 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trim43bP86448 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43bP86448 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43bP86448 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.7□□□□□ -0.38
Trim43bP86448 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43bP86448 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43bP86448 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.69□□□□□ -0.38
Trim43bP86448 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim43bP86448 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43bP86448 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43bP86448 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43bP86448 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43bP86448 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43bP86448 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trim43bP86448 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43bP86448 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim43bP86448 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43bP86448 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Trim43bP86448 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43bP86448 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43bP86448 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.69□□□□□ -0.38
Trim43bP86448 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.69□□□□□ -0.38
Trim43bP86448 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43bP86448 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.69□□□□□ -0.38
Trim43bP86448 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43bP86448 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43bP86448 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43bP86448 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43bP86448 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim43bP86448 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trim43bP86448 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43bP86448 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43bP86448 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43bP86448 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43bP86448 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43bP86448 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43bP86448 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.68□□□□□ -0.38
Trim43bP86448 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43bP86448 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43bP86448 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43bP86448 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trim43bP86448 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trim43bP86448 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43bP86448 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43bP86448 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.68□□□□□ -0.38
Trim43bP86448 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43bP86448 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43bP86448 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43bP86448 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trim43bP86448 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43bP86448 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43bP86448 Gm23931-201ENSMUST00000103842 109 ntBASIC12.68□□□□□ -0.38
Trim43bP86448 Gm26185-201ENSMUST00000157692 266 ntBASIC12.68□□□□□ -0.38
Trim43bP86448 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.68□□□□□ -0.38
Trim43bP86448 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43bP86448 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.68□□□□□ -0.38
Trim43bP86448 Gm45331-201ENSMUST00000209868 554 ntBASIC12.68□□□□□ -0.38
Trim43bP86448 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.68□□□□□ -0.38
Trim43bP86448 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Trim43bP86448 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43bP86448 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43bP86448 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43bP86448 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trim43bP86448 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43bP86448 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43bP86448 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.68□□□□□ -0.38
Trim43bP86448 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43bP86448 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trim43bP86448 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43bP86448 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43bP86448 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim43bP86448 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms