Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shox2P70390 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.16□□□□□ -0.46
Shox2P70390 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shox2P70390 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Shox2P70390 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shox2P70390 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shox2P70390 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shox2P70390 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Shox2P70390 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Shox2P70390 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Shox2P70390 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shox2P70390 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
Shox2P70390 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.16□□□□□ -0.46
Shox2P70390 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Shox2P70390 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shox2P70390 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Shox2P70390 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shox2P70390 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shox2P70390 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shox2P70390 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shox2P70390 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shox2P70390 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.15□□□□□ -0.46
Shox2P70390 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shox2P70390 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shox2P70390 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Shox2P70390 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shox2P70390 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.46
Shox2P70390 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shox2P70390 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.15□□□□□ -0.46
Shox2P70390 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Shox2P70390 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Shox2P70390 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Shox2P70390 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shox2P70390 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shox2P70390 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shox2P70390 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Shox2P70390 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Shox2P70390 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Shox2P70390 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.15□□□□□ -0.46
Shox2P70390 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Shox2P70390 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Shox2P70390 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.15□□□□□ -0.46
Shox2P70390 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shox2P70390 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.15□□□□□ -0.46
Shox2P70390 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shox2P70390 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Shox2P70390 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Shox2P70390 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.15□□□□□ -0.46
Shox2P70390 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Shox2P70390 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shox2P70390 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Shox2P70390 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shox2P70390 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shox2P70390 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shox2P70390 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Shox2P70390 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shox2P70390 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Shox2P70390 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.15□□□□□ -0.47
Shox2P70390 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.15□□□□□ -0.47
Shox2P70390 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.15□□□□□ -0.47
Shox2P70390 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Shox2P70390 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shox2P70390 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Shox2P70390 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Shox2P70390 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shox2P70390 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Shox2P70390 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shox2P70390 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.14□□□□□ -0.47
Shox2P70390 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Shox2P70390 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shox2P70390 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Shox2P70390 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Shox2P70390 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Shox2P70390 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shox2P70390 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shox2P70390 Snord83b-201ENSMUST00000104546 94 ntBASIC12.14□□□□□ -0.47
Shox2P70390 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
Shox2P70390 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.14□□□□□ -0.47
Shox2P70390 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Shox2P70390 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.14□□□□□ -0.47
Shox2P70390 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Shox2P70390 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Shox2P70390 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Shox2P70390 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.14□□□□□ -0.47
Shox2P70390 Gm23119-201ENSMUST00000158610 140 ntBASIC12.14□□□□□ -0.47
Shox2P70390 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shox2P70390 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Shox2P70390 Gm9022-201ENSMUST00000182482 992 ntBASIC12.14□□□□□ -0.47
Shox2P70390 Gm27243-201ENSMUST00000183964 521 ntBASIC12.14□□□□□ -0.47
Shox2P70390 Gm44397-201ENSMUST00000195950 113 ntBASIC12.14□□□□□ -0.47
Shox2P70390 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shox2P70390 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Shox2P70390 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shox2P70390 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shox2P70390 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.14□□□□□ -0.47
Shox2P70390 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shox2P70390 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shox2P70390 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Shox2P70390 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shox2P70390 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms