Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm3P62311 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm3P62311 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.19□□□□□ -0.62
Lsm3P62311 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm3P62311 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm3P62311 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm3P62311 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm3P62311 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.19□□□□□ -0.62
Lsm3P62311 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.19□□□□□ -0.62
Lsm3P62311 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.19□□□□□ -0.62
Lsm3P62311 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Lsm3P62311 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Lsm3P62311 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm3P62311 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Lsm3P62311 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm3P62311 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm3P62311 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm3P62311 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm3P62311 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm3P62311 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm3P62311 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.19□□□□□ -0.62
Lsm3P62311 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Lsm3P62311 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm3P62311 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm3P62311 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Lsm3P62311 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm3P62311 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm3P62311 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm3P62311 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm3P62311 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm3P62311 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Lsm3P62311 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm3P62311 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm3P62311 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm3P62311 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm3P62311 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.19□□□□□ -0.62
Lsm3P62311 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm3P62311 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Lsm3P62311 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm3P62311 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm3P62311 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm3P62311 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lsm3P62311 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.18□□□□□ -0.62
Lsm3P62311 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.18□□□□□ -0.62
Lsm3P62311 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lsm3P62311 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lsm3P62311 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.18□□□□□ -0.62
Lsm3P62311 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Lsm3P62311 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lsm3P62311 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Lsm3P62311 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Lsm3P62311 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lsm3P62311 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lsm3P62311 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lsm3P62311 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Lsm3P62311 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Lsm3P62311 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Lsm3P62311 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lsm3P62311 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Lsm3P62311 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.18□□□□□ -0.62
Lsm3P62311 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC11.18□□□□□ -0.62
Lsm3P62311 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.18□□□□□ -0.62
Lsm3P62311 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Lsm3P62311 Gm26464-201ENSMUST00000157094 305 ntBASIC11.18□□□□□ -0.62
Lsm3P62311 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.18□□□□□ -0.62
Lsm3P62311 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.18□□□□□ -0.62
Lsm3P62311 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Lsm3P62311 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.18□□□□□ -0.62
Lsm3P62311 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lsm3P62311 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lsm3P62311 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lsm3P62311 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lsm3P62311 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lsm3P62311 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Lsm3P62311 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Lsm3P62311 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lsm3P62311 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lsm3P62311 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.18□□□□□ -0.62
Lsm3P62311 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Lsm3P62311 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Lsm3P62311 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lsm3P62311 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Lsm3P62311 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Lsm3P62311 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Lsm3P62311 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lsm3P62311 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lsm3P62311 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lsm3P62311 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lsm3P62311 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.17□□□□□ -0.62
Lsm3P62311 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lsm3P62311 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Lsm3P62311 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lsm3P62311 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Lsm3P62311 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lsm3P62311 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Lsm3P62311 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lsm3P62311 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lsm3P62311 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Lsm3P62311 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lsm3P62311 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms