Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sf3b6P59708 Gm5276-201ENSMUST00000196683 1047 ntBASIC10.95□□□□□ -0.66
Sf3b6P59708 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sf3b6P59708 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sf3b6P59708 AC162801.1-201ENSMUST00000220612 198 ntBASIC10.95□□□□□ -0.66
Sf3b6P59708 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sf3b6P59708 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sf3b6P59708 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sf3b6P59708 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sf3b6P59708 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sf3b6P59708 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sf3b6P59708 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC10.95□□□□□ -0.66
Sf3b6P59708 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sf3b6P59708 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sf3b6P59708 AL645783.1-201ENSMUST00000221416 1832 ntBASIC10.95□□□□□ -0.66
Sf3b6P59708 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sf3b6P59708 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sf3b6P59708 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sf3b6P59708 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sf3b6P59708 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sf3b6P59708 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sf3b6P59708 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.95□□□□□ -0.66
Sf3b6P59708 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sf3b6P59708 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sf3b6P59708 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sf3b6P59708 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sf3b6P59708 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sf3b6P59708 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sf3b6P59708 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sf3b6P59708 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.94□□□□□ -0.66
Sf3b6P59708 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sf3b6P59708 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sf3b6P59708 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sf3b6P59708 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sf3b6P59708 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Sf3b6P59708 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sf3b6P59708 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.94□□□□□ -0.66
Sf3b6P59708 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sf3b6P59708 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sf3b6P59708 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sf3b6P59708 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.94□□□□□ -0.66
Sf3b6P59708 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sf3b6P59708 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sf3b6P59708 Gm11618-201ENSMUST00000117946 267 ntBASIC10.94□□□□□ -0.66
Sf3b6P59708 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC10.94□□□□□ -0.66
Sf3b6P59708 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.94□□□□□ -0.66
Sf3b6P59708 Mir1894-201ENSMUST00000122802 81 ntBASIC10.94□□□□□ -0.66
Sf3b6P59708 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sf3b6P59708 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC10.94□□□□□ -0.66
Sf3b6P59708 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sf3b6P59708 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.94□□□□□ -0.66
Sf3b6P59708 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sf3b6P59708 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sf3b6P59708 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC10.94□□□□□ -0.66
Sf3b6P59708 Gm37748-201ENSMUST00000194379 1140 ntBASIC10.94□□□□□ -0.66
Sf3b6P59708 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC10.94□□□□□ -0.66
Sf3b6P59708 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC10.94□□□□□ -0.66
Sf3b6P59708 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC10.94□□□□□ -0.66
Sf3b6P59708 Gm44799-201ENSMUST00000207639 1202 ntBASIC10.94□□□□□ -0.66
Sf3b6P59708 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sf3b6P59708 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Sf3b6P59708 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sf3b6P59708 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sf3b6P59708 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sf3b6P59708 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sf3b6P59708 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sf3b6P59708 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sf3b6P59708 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sf3b6P59708 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sf3b6P59708 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sf3b6P59708 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sf3b6P59708 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sf3b6P59708 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sf3b6P59708 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sf3b6P59708 Gm14608-201ENSMUST00000120030 1553 ntBASIC10.94□□□□□ -0.66
Sf3b6P59708 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sf3b6P59708 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.94□□□□□ -0.66
Sf3b6P59708 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sf3b6P59708 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sf3b6P59708 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Sf3b6P59708 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sf3b6P59708 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sf3b6P59708 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.93□□□□□ -0.66
Sf3b6P59708 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.93□□□□□ -0.66
Sf3b6P59708 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sf3b6P59708 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sf3b6P59708 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sf3b6P59708 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sf3b6P59708 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sf3b6P59708 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sf3b6P59708 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Sf3b6P59708 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sf3b6P59708 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sf3b6P59708 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sf3b6P59708 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Sf3b6P59708 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sf3b6P59708 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Sf3b6P59708 Gm9022-201ENSMUST00000182482 992 ntBASIC10.93□□□□□ -0.66
Sf3b6P59708 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC10.93□□□□□ -0.66
Sf3b6P59708 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms