Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Gm7003-201ENSMUST00000195089 312 ntBASIC12.39□□□□□ -0.43
SmoP56726 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.39□□□□□ -0.43
SmoP56726 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.39□□□□□ -0.43
SmoP56726 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.39□□□□□ -0.43
SmoP56726 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.39□□□□□ -0.43
SmoP56726 Gm45433-201ENSMUST00000209386 247 ntBASIC12.39□□□□□ -0.43
SmoP56726 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.39□□□□□ -0.43
SmoP56726 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SmoP56726 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SmoP56726 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SmoP56726 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SmoP56726 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SmoP56726 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SmoP56726 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SmoP56726 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SmoP56726 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SmoP56726 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SmoP56726 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
SmoP56726 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.39□□□□□ -0.43
SmoP56726 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SmoP56726 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SmoP56726 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SmoP56726 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.38□□□□□ -0.43
SmoP56726 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SmoP56726 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SmoP56726 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.38□□□□□ -0.43
SmoP56726 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SmoP56726 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SmoP56726 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SmoP56726 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SmoP56726 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.38□□□□□ -0.43
SmoP56726 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SmoP56726 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
SmoP56726 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SmoP56726 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SmoP56726 Gm11439-201ENSMUST00000118598 409 ntBASIC12.38□□□□□ -0.43
SmoP56726 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
SmoP56726 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.38□□□□□ -0.43
SmoP56726 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SmoP56726 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SmoP56726 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SmoP56726 Gm37666-201ENSMUST00000194110 866 ntBASIC12.38□□□□□ -0.43
SmoP56726 Gm17812-201ENSMUST00000204935 318 ntBASIC12.38□□□□□ -0.43
SmoP56726 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SmoP56726 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SmoP56726 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.38□□□□□ -0.43
SmoP56726 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.38□□□□□ -0.43
SmoP56726 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SmoP56726 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SmoP56726 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SmoP56726 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SmoP56726 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.38□□□□□ -0.43
SmoP56726 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SmoP56726 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SmoP56726 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SmoP56726 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SmoP56726 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SmoP56726 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.38□□□□□ -0.43
SmoP56726 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
SmoP56726 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SmoP56726 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SmoP56726 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SmoP56726 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SmoP56726 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SmoP56726 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SmoP56726 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.37□□□□□ -0.43
SmoP56726 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SmoP56726 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SmoP56726 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SmoP56726 Gm23912-201ENSMUST00000104687 87 ntBASIC12.37□□□□□ -0.43
SmoP56726 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SmoP56726 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.37□□□□□ -0.43
SmoP56726 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SmoP56726 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
SmoP56726 Gm27341-201ENSMUST00000183570 106 ntBASIC12.37□□□□□ -0.43
SmoP56726 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.37□□□□□ -0.43
SmoP56726 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SmoP56726 Gm18711-201ENSMUST00000199341 750 ntBASIC12.37□□□□□ -0.43
SmoP56726 Gm44124-201ENSMUST00000204159 472 ntBASIC12.37□□□□□ -0.43
SmoP56726 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SmoP56726 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SmoP56726 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SmoP56726 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SmoP56726 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SmoP56726 Gm8385-201ENSMUST00000058999 643 ntBASIC12.37□□□□□ -0.43
SmoP56726 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SmoP56726 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.37□□□□□ -0.43
SmoP56726 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
SmoP56726 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SmoP56726 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SmoP56726 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SmoP56726 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SmoP56726 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SmoP56726 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SmoP56726 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SmoP56726 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SmoP56726 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SmoP56726 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SmoP56726 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.37□□□□□ -0.43
SmoP56726 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms