Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.26□□□□□ -0.61
Cdh11P55288 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh11P55288 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh11P55288 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.26□□□□□ -0.61
Cdh11P55288 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh11P55288 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.26□□□□□ -0.61
Cdh11P55288 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Cdh11P55288 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh11P55288 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh11P55288 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh11P55288 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh11P55288 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh11P55288 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh11P55288 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh11P55288 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Cdh11P55288 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.26□□□□□ -0.61
Cdh11P55288 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh11P55288 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Cdh11P55288 Gm38002-201ENSMUST00000193255 180 ntBASIC11.26□□□□□ -0.61
Cdh11P55288 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh11P55288 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh11P55288 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh11P55288 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh11P55288 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh11P55288 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Cdh11P55288 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh11P55288 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.26□□□□□ -0.61
Cdh11P55288 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh11P55288 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.26□□□□□ -0.61
Cdh11P55288 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh11P55288 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh11P55288 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh11P55288 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh11P55288 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh11P55288 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.26□□□□□ -0.61
Cdh11P55288 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh11P55288 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Cdh11P55288 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.26□□□□□ -0.61
Cdh11P55288 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh11P55288 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh11P55288 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh11P55288 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh11P55288 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh11P55288 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh11P55288 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh11P55288 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.25□□□□□ -0.61
Cdh11P55288 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh11P55288 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh11P55288 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh11P55288 Gm2231-201ENSMUST00000125661 612 ntBASIC11.25□□□□□ -0.61
Cdh11P55288 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cdh11P55288 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.25□□□□□ -0.61
Cdh11P55288 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.25□□□□□ -0.61
Cdh11P55288 Gm26185-201ENSMUST00000157692 266 ntBASIC11.25□□□□□ -0.61
Cdh11P55288 Gm7029-201ENSMUST00000173226 450 ntBASIC11.25□□□□□ -0.61
Cdh11P55288 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.25□□□□□ -0.61
Cdh11P55288 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.25□□□□□ -0.61
Cdh11P55288 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.25□□□□□ -0.61
Cdh11P55288 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh11P55288 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Cdh11P55288 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh11P55288 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh11P55288 Gm9823-201ENSMUST00000051212 327 ntBASIC11.25□□□□□ -0.61
Cdh11P55288 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Cdh11P55288 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.25□□□□□ -0.61
Cdh11P55288 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.25□□□□□ -0.61
Cdh11P55288 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cdh11P55288 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh11P55288 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.25□□□□□ -0.61
Cdh11P55288 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh11P55288 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Cdh11P55288 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh11P55288 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh11P55288 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Cdh11P55288 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh11P55288 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh11P55288 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh11P55288 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.24□□□□□ -0.61
Cdh11P55288 Map1b-203ENSMUST00000223725 2669 ntBASIC11.24□□□□□ -0.61
Cdh11P55288 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh11P55288 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh11P55288 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh11P55288 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.24□□□□□ -0.61
Cdh11P55288 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh11P55288 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh11P55288 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh11P55288 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh11P55288 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.24□□□□□ -0.61
Cdh11P55288 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Cdh11P55288 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.24□□□□□ -0.61
Cdh11P55288 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh11P55288 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.24□□□□□ -0.61
Cdh11P55288 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.24□□□□□ -0.61
Cdh11P55288 Gm6458-201ENSMUST00000211573 635 ntBASIC11.24□□□□□ -0.61
Cdh11P55288 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.24□□□□□ -0.61
Cdh11P55288 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.24□□□□□ -0.61
Cdh11P55288 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Cdh11P55288 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh11P55288 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh11P55288 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms