Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Gm7851-201ENSMUST00000117574 323 ntBASIC12.52□□□□□ -0.41
Ddx6P54823 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.52□□□□□ -0.41
Ddx6P54823 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx6P54823 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.52□□□□□ -0.41
Ddx6P54823 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Ddx6P54823 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.52□□□□□ -0.41
Ddx6P54823 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx6P54823 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.52□□□□□ -0.41
Ddx6P54823 Gm2965-201ENSMUST00000198365 343 ntBASIC12.52□□□□□ -0.41
Ddx6P54823 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.52□□□□□ -0.41
Ddx6P54823 Gm8956-201ENSMUST00000203939 825 ntBASIC12.52□□□□□ -0.41
Ddx6P54823 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx6P54823 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx6P54823 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.52□□□□□ -0.41
Ddx6P54823 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx6P54823 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx6P54823 Ntng1-201ENSMUST00000051253 327 ntBASIC12.52□□□□□ -0.41
Ddx6P54823 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Ddx6P54823 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx6P54823 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx6P54823 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx6P54823 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx6P54823 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Ddx6P54823 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx6P54823 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx6P54823 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx6P54823 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx6P54823 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx6P54823 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx6P54823 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx6P54823 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx6P54823 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx6P54823 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx6P54823 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx6P54823 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx6P54823 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx6P54823 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx6P54823 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx6P54823 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.51□□□□□ -0.41
Ddx6P54823 Gm23251-201ENSMUST00000103773 110 ntBASIC12.51□□□□□ -0.41
Ddx6P54823 Gm12857-201ENSMUST00000117678 592 ntBASIC12.51□□□□□ -0.41
Ddx6P54823 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.51□□□□□ -0.41
Ddx6P54823 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.51□□□□□ -0.41
Ddx6P54823 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.51□□□□□ -0.41
Ddx6P54823 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx6P54823 Gm8100-201ENSMUST00000182906 988 ntBASIC12.51□□□□□ -0.41
Ddx6P54823 Gm19353-201ENSMUST00000184561 445 ntBASIC12.51□□□□□ -0.41
Ddx6P54823 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.51□□□□□ -0.41
Ddx6P54823 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.51□□□□□ -0.41
Ddx6P54823 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.51□□□□□ -0.41
Ddx6P54823 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.51□□□□□ -0.41
Ddx6P54823 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx6P54823 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx6P54823 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx6P54823 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx6P54823 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx6P54823 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx6P54823 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx6P54823 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx6P54823 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx6P54823 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.51□□□□□ -0.41
Ddx6P54823 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx6P54823 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx6P54823 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx6P54823 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx6P54823 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx6P54823 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx6P54823 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx6P54823 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx6P54823 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ddx6P54823 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx6P54823 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx6P54823 Grk6-205ENSMUST00000224653 2976 ntBASIC12.51□□□□□ -0.41
Ddx6P54823 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx6P54823 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ddx6P54823 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx6P54823 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx6P54823 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx6P54823 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.5□□□□□ -0.41
Ddx6P54823 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx6P54823 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx6P54823 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx6P54823 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx6P54823 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx6P54823 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx6P54823 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.5□□□□□ -0.41
Ddx6P54823 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.5□□□□□ -0.41
Ddx6P54823 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx6P54823 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx6P54823 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ddx6P54823 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx6P54823 Gm12165-201ENSMUST00000117047 342 ntBASIC12.5□□□□□ -0.41
Ddx6P54823 Gm15432-201ENSMUST00000121106 195 ntBASIC12.5□□□□□ -0.41
Ddx6P54823 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx6P54823 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.5□□□□□ -0.41
Ddx6P54823 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.5□□□□□ -0.41
Ddx6P54823 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.5□□□□□ -0.41
Ddx6P54823 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx6P54823 Gm3508-201ENSMUST00000186012 792 ntBASIC12.5□□□□□ -0.41
Ddx6P54823 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms