Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fdft1P53798 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fdft1P53798 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fdft1P53798 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Fdft1P53798 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.34□□□□□ -0.43
Fdft1P53798 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fdft1P53798 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fdft1P53798 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fdft1P53798 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fdft1P53798 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.34□□□□□ -0.43
Fdft1P53798 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Fdft1P53798 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fdft1P53798 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.34□□□□□ -0.43
Fdft1P53798 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fdft1P53798 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fdft1P53798 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Fdft1P53798 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fdft1P53798 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fdft1P53798 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.33□□□□□ -0.44
Fdft1P53798 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.33□□□□□ -0.44
Fdft1P53798 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.33□□□□□ -0.44
Fdft1P53798 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fdft1P53798 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fdft1P53798 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Fdft1P53798 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Fdft1P53798 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Fdft1P53798 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fdft1P53798 Gm14760-201ENSMUST00000121831 999 ntBASIC12.33□□□□□ -0.44
Fdft1P53798 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Fdft1P53798 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.33□□□□□ -0.44
Fdft1P53798 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Fdft1P53798 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Fdft1P53798 Rmrp-201ENSMUST00000157463 271 ntBASIC12.33□□□□□ -0.44
Fdft1P53798 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Fdft1P53798 Gm8738-201ENSMUST00000172606 329 ntBASIC12.33□□□□□ -0.44
Fdft1P53798 Gm9630-201ENSMUST00000178304 885 ntBASIC12.33□□□□□ -0.44
Fdft1P53798 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.33□□□□□ -0.44
Fdft1P53798 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.33□□□□□ -0.44
Fdft1P53798 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Fdft1P53798 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.33□□□□□ -0.44
Fdft1P53798 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.33□□□□□ -0.44
Fdft1P53798 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.33□□□□□ -0.44
Fdft1P53798 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.33□□□□□ -0.44
Fdft1P53798 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fdft1P53798 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fdft1P53798 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fdft1P53798 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.33□□□□□ -0.44
Fdft1P53798 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fdft1P53798 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.33□□□□□ -0.44
Fdft1P53798 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fdft1P53798 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Fdft1P53798 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Fdft1P53798 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fdft1P53798 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fdft1P53798 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Fdft1P53798 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fdft1P53798 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fdft1P53798 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.33□□□□□ -0.44
Fdft1P53798 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Fdft1P53798 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fdft1P53798 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Fdft1P53798 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fdft1P53798 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Fdft1P53798 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fdft1P53798 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fdft1P53798 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Fdft1P53798 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Fdft1P53798 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Fdft1P53798 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Fdft1P53798 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Fdft1P53798 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Fdft1P53798 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Fdft1P53798 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Fdft1P53798 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Fdft1P53798 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.32□□□□□ -0.44
Fdft1P53798 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.32□□□□□ -0.44
Fdft1P53798 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Fdft1P53798 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.32□□□□□ -0.44
Fdft1P53798 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Fdft1P53798 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Fdft1P53798 Gm24231-201ENSMUST00000104315 133 ntBASIC12.32□□□□□ -0.44
Fdft1P53798 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Fdft1P53798 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Fdft1P53798 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Fdft1P53798 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Fdft1P53798 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Fdft1P53798 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.32□□□□□ -0.44
Fdft1P53798 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.32□□□□□ -0.44
Fdft1P53798 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Fdft1P53798 Gm25261-201ENSMUST00000157416 134 ntBASIC12.32□□□□□ -0.44
Fdft1P53798 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Fdft1P53798 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Fdft1P53798 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.32□□□□□ -0.44
Fdft1P53798 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Fdft1P53798 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.32□□□□□ -0.44
Fdft1P53798 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Fdft1P53798 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Fdft1P53798 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Fdft1P53798 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Fdft1P53798 Snora73a-201ENSMUST00000082453 205 ntBASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms