Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Pdx1P52946 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pdx1P52946 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pdx1P52946 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdx1P52946 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdx1P52946 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdx1P52946 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdx1P52946 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pdx1P52946 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdx1P52946 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdx1P52946 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdx1P52946 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Pdx1P52946 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdx1P52946 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
Pdx1P52946 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdx1P52946 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pdx1P52946 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pdx1P52946 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdx1P52946 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.18□□□□□ -0.46
Pdx1P52946 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.18□□□□□ -0.46
Pdx1P52946 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pdx1P52946 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.18□□□□□ -0.46
Pdx1P52946 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.18□□□□□ -0.46
Pdx1P52946 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pdx1P52946 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pdx1P52946 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pdx1P52946 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Pdx1P52946 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdx1P52946 Gm24934-201ENSMUST00000103764 111 ntBASIC12.18□□□□□ -0.46
Pdx1P52946 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Pdx1P52946 Gm14726-201ENSMUST00000120623 896 ntBASIC12.18□□□□□ -0.46
Pdx1P52946 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Pdx1P52946 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.18□□□□□ -0.46
Pdx1P52946 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.18□□□□□ -0.46
Pdx1P52946 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pdx1P52946 Gm31256-201ENSMUST00000194705 506 ntBASIC12.18□□□□□ -0.46
Pdx1P52946 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.18□□□□□ -0.46
Pdx1P52946 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Pdx1P52946 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Pdx1P52946 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.18□□□□□ -0.46
Pdx1P52946 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdx1P52946 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pdx1P52946 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdx1P52946 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Pdx1P52946 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdx1P52946 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pdx1P52946 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Pdx1P52946 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdx1P52946 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdx1P52946 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdx1P52946 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.18□□□□□ -0.46
Pdx1P52946 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Pdx1P52946 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdx1P52946 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdx1P52946 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pdx1P52946 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdx1P52946 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Pdx1P52946 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdx1P52946 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdx1P52946 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Pdx1P52946 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdx1P52946 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pdx1P52946 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Pdx1P52946 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdx1P52946 Gm24255-201ENSMUST00000104481 128 ntBASIC12.17□□□□□ -0.46
Pdx1P52946 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Pdx1P52946 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pdx1P52946 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pdx1P52946 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pdx1P52946 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Pdx1P52946 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pdx1P52946 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pdx1P52946 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.17□□□□□ -0.46
Pdx1P52946 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdx1P52946 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pdx1P52946 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdx1P52946 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdx1P52946 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdx1P52946 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdx1P52946 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.17□□□□□ -0.46
Pdx1P52946 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Pdx1P52946 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Pdx1P52946 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdx1P52946 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.17□□□□□ -0.46
Pdx1P52946 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pdx1P52946 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.17□□□□□ -0.46
Pdx1P52946 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.17□□□□□ -0.46
Pdx1P52946 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pdx1P52946 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pdx1P52946 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Pdx1P52946 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.17□□□□□ -0.46
Pdx1P52946 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdx1P52946 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdx1P52946 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pdx1P52946 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdx1P52946 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.16□□□□□ -0.46
Pdx1P52946 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdx1P52946 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdx1P52946 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pdx1P52946 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms