Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.63□□□□□ -0.39
ClgnP52194 Gm5781-201ENSMUST00000219792 443 ntBASIC12.63□□□□□ -0.39
ClgnP52194 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
ClgnP52194 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ClgnP52194 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.63□□□□□ -0.39
ClgnP52194 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ClgnP52194 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ClgnP52194 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClgnP52194 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
ClgnP52194 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ClgnP52194 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ClgnP52194 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC12.63□□□□□ -0.39
ClgnP52194 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClgnP52194 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClgnP52194 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClgnP52194 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ClgnP52194 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClgnP52194 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClgnP52194 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClgnP52194 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClgnP52194 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.62□□□□□ -0.39
ClgnP52194 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.62□□□□□ -0.39
ClgnP52194 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClgnP52194 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClgnP52194 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ClgnP52194 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.62□□□□□ -0.39
ClgnP52194 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClgnP52194 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClgnP52194 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClgnP52194 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClgnP52194 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClgnP52194 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ClgnP52194 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.62□□□□□ -0.39
ClgnP52194 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClgnP52194 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClgnP52194 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClgnP52194 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.62□□□□□ -0.39
ClgnP52194 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
ClgnP52194 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.62□□□□□ -0.39
ClgnP52194 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
ClgnP52194 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.62□□□□□ -0.39
ClgnP52194 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ClgnP52194 Gm16296-201ENSMUST00000159905 325 ntBASIC12.62□□□□□ -0.39
ClgnP52194 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ClgnP52194 Gm18062-201ENSMUST00000208020 547 ntBASIC12.62□□□□□ -0.39
ClgnP52194 Gm18055-201ENSMUST00000208254 547 ntBASIC12.62□□□□□ -0.39
ClgnP52194 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.62□□□□□ -0.39
ClgnP52194 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.62□□□□□ -0.39
ClgnP52194 Gm45930-201ENSMUST00000221330 292 ntBASIC12.62□□□□□ -0.39
ClgnP52194 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.62□□□□□ -0.39
ClgnP52194 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ClgnP52194 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ClgnP52194 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClgnP52194 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClgnP52194 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClgnP52194 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClgnP52194 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.62□□□□□ -0.39
ClgnP52194 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClgnP52194 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClgnP52194 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClgnP52194 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClgnP52194 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ClgnP52194 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.62□□□□□ -0.39
ClgnP52194 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClgnP52194 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
ClgnP52194 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClgnP52194 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClgnP52194 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClgnP52194 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClgnP52194 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ClgnP52194 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClgnP52194 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClgnP52194 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClgnP52194 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClgnP52194 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClgnP52194 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClgnP52194 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClgnP52194 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.61□□□□□ -0.39
ClgnP52194 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ClgnP52194 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClgnP52194 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClgnP52194 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClgnP52194 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClgnP52194 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.61□□□□□ -0.39
ClgnP52194 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ClgnP52194 Gm24548-201ENSMUST00000158650 108 ntBASIC12.61□□□□□ -0.39
ClgnP52194 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.61□□□□□ -0.39
ClgnP52194 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
ClgnP52194 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClgnP52194 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
ClgnP52194 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
ClgnP52194 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClgnP52194 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClgnP52194 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ClgnP52194 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ClgnP52194 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
ClgnP52194 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClgnP52194 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClgnP52194 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClgnP52194 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms