Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm37318-201ENSMUST00000194325 695 ntBASIC13.6□□□□□ -0.23
Brca1P48754 Gm38017-201ENSMUST00000194768 695 ntBASIC13.6□□□□□ -0.23
Brca1P48754 Gm37287-201ENSMUST00000195449 695 ntBASIC13.6□□□□□ -0.23
Brca1P48754 Gm37793-201ENSMUST00000195548 695 ntBASIC13.6□□□□□ -0.23
Brca1P48754 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC13.6□□□□□ -0.23
Brca1P48754 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brca1P48754 Gm14005-208ENSMUST00000223654 681 ntBASIC13.6□□□□□ -0.23
Brca1P48754 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brca1P48754 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Brca1P48754 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brca1P48754 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Brca1P48754 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.59□□□□□ -0.23
Brca1P48754 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC13.59□□□□□ -0.23
Brca1P48754 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Brca1P48754 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.59□□□□□ -0.23
Brca1P48754 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brca1P48754 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Brca1P48754 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
Brca1P48754 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC13.59□□□□□ -0.23
Brca1P48754 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Brca1P48754 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brca1P48754 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brca1P48754 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brca1P48754 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brca1P48754 Gm26989-201ENSMUST00000182608 749 ntBASIC13.59□□□□□ -0.23
Brca1P48754 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC13.59□□□□□ -0.23
Brca1P48754 Gm43752-201ENSMUST00000198475 697 ntBASIC13.59□□□□□ -0.23
Brca1P48754 Gm44647-201ENSMUST00000207402 428 ntBASIC13.59□□□□□ -0.23
Brca1P48754 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Brca1P48754 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brca1P48754 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC13.59□□□□□ -0.23
Brca1P48754 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.59□□□□□ -0.23
Brca1P48754 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC13.59□□□□□ -0.23
Brca1P48754 Gm16380-201ENSMUST00000077997 478 ntBASIC13.59□□□□□ -0.23
Brca1P48754 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brca1P48754 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brca1P48754 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brca1P48754 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Brca1P48754 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Brca1P48754 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brca1P48754 Gm5380-201ENSMUST00000119296 2136 ntBASIC13.59□□□□□ -0.23
Brca1P48754 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Brca1P48754 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Brca1P48754 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Brca1P48754 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Brca1P48754 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Brca1P48754 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Brca1P48754 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Brca1P48754 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Brca1P48754 Gm9507-202ENSMUST00000180157 654 ntBASIC13.58□□□□□ -0.24
Brca1P48754 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Brca1P48754 Gm7504-201ENSMUST00000201449 424 ntBASIC13.58□□□□□ -0.24
Brca1P48754 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC13.58□□□□□ -0.24
Brca1P48754 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Brca1P48754 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Brca1P48754 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Brca1P48754 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Brca1P48754 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Brca1P48754 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.58□□□□□ -0.24
Brca1P48754 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Brca1P48754 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Brca1P48754 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Brca1P48754 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Brca1P48754 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.58□□□□□ -0.24
Brca1P48754 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.58□□□□□ -0.24
Brca1P48754 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Brca1P48754 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Brca1P48754 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Brca1P48754 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Brca1P48754 Gm44056-201ENSMUST00000204623 1427 ntBASIC13.58□□□□□ -0.24
Brca1P48754 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.58□□□□□ -0.24
Brca1P48754 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Brca1P48754 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Brca1P48754 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Brca1P48754 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Brca1P48754 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Brca1P48754 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Brca1P48754 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Brca1P48754 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Brca1P48754 Gm24791-201ENSMUST00000104284 131 ntBASIC13.57□□□□□ -0.24
Brca1P48754 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Brca1P48754 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC13.57□□□□□ -0.24
Brca1P48754 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brca1P48754 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Brca1P48754 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Brca1P48754 Gm13351-201ENSMUST00000118087 414 ntBASIC13.57□□□□□ -0.24
Brca1P48754 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC13.57□□□□□ -0.24
Brca1P48754 Gm42816-201ENSMUST00000198433 325 ntBASIC13.57□□□□□ -0.24
Brca1P48754 Gm44506-201ENSMUST00000206278 965 ntBASIC13.57□□□□□ -0.24
Brca1P48754 Gm6108-201ENSMUST00000208365 367 ntBASIC13.57□□□□□ -0.24
Brca1P48754 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Brca1P48754 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Brca1P48754 AC102368.1-201ENSMUST00000227161 892 ntBASIC13.57□□□□□ -0.24
Brca1P48754 Gm4978-201ENSMUST00000071565 801 ntBASIC13.57□□□□□ -0.24
Brca1P48754 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Brca1P48754 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brca1P48754 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Brca1P48754 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Brca1P48754 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brca1P48754 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms