Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
GdnfP48540 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
GdnfP48540 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
GdnfP48540 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
GdnfP48540 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC10.85□□□□□ -0.67
GdnfP48540 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
GdnfP48540 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
GdnfP48540 Gm12203-201ENSMUST00000118235 598 ntBASIC10.85□□□□□ -0.67
GdnfP48540 Gm12209-201ENSMUST00000120089 596 ntBASIC10.85□□□□□ -0.67
GdnfP48540 Gm13123-201ENSMUST00000122173 492 ntBASIC10.85□□□□□ -0.67
GdnfP48540 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
GdnfP48540 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
GdnfP48540 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
GdnfP48540 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
GdnfP48540 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC10.85□□□□□ -0.67
GdnfP48540 Gm24196-201ENSMUST00000179161 110 ntBASIC10.85□□□□□ -0.67
GdnfP48540 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC10.85□□□□□ -0.67
GdnfP48540 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC10.85□□□□□ -0.67
GdnfP48540 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC10.85□□□□□ -0.67
GdnfP48540 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
GdnfP48540 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
GdnfP48540 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
GdnfP48540 Gm17794-201ENSMUST00000220252 955 ntBASIC10.85□□□□□ -0.67
GdnfP48540 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC10.85□□□□□ -0.67
GdnfP48540 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
GdnfP48540 Gm26035-201ENSMUST00000083065 308 ntBASIC10.85□□□□□ -0.67
GdnfP48540 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
GdnfP48540 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
GdnfP48540 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
GdnfP48540 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
GdnfP48540 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
GdnfP48540 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
GdnfP48540 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.85□□□□□ -0.67
GdnfP48540 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
GdnfP48540 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
GdnfP48540 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.85□□□□□ -0.67
GdnfP48540 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
GdnfP48540 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
GdnfP48540 AC107452.3-201ENSMUST00000228807 1308 ntBASIC10.84□□□□□ -0.67
GdnfP48540 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
GdnfP48540 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
GdnfP48540 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
GdnfP48540 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
GdnfP48540 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
GdnfP48540 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
GdnfP48540 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
GdnfP48540 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
GdnfP48540 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
GdnfP48540 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
GdnfP48540 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
GdnfP48540 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
GdnfP48540 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
GdnfP48540 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.84□□□□□ -0.67
GdnfP48540 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
GdnfP48540 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
GdnfP48540 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
GdnfP48540 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC10.84□□□□□ -0.67
GdnfP48540 Gm11618-201ENSMUST00000117946 267 ntBASIC10.84□□□□□ -0.67
GdnfP48540 Gm11814-201ENSMUST00000119515 929 ntBASIC10.84□□□□□ -0.67
GdnfP48540 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
GdnfP48540 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
GdnfP48540 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
GdnfP48540 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.84□□□□□ -0.67
GdnfP48540 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC10.84□□□□□ -0.67
GdnfP48540 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.84□□□□□ -0.67
GdnfP48540 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC10.84□□□□□ -0.67
GdnfP48540 AC130829.1-201ENSMUST00000221548 494 ntBASIC10.84□□□□□ -0.67
GdnfP48540 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.84□□□□□ -0.67
GdnfP48540 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
GdnfP48540 Gm16372-201ENSMUST00000073088 450 ntBASIC10.84□□□□□ -0.67
GdnfP48540 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
GdnfP48540 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
GdnfP48540 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
GdnfP48540 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
GdnfP48540 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
GdnfP48540 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
GdnfP48540 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
GdnfP48540 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
GdnfP48540 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
GdnfP48540 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
GdnfP48540 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
GdnfP48540 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
GdnfP48540 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
GdnfP48540 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
GdnfP48540 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
GdnfP48540 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
GdnfP48540 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
GdnfP48540 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
GdnfP48540 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
GdnfP48540 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC10.84□□□□□ -0.67
GdnfP48540 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
GdnfP48540 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC10.84□□□□□ -0.67
GdnfP48540 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
GdnfP48540 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
GdnfP48540 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
GdnfP48540 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.83□□□□□ -0.68
GdnfP48540 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
GdnfP48540 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
GdnfP48540 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
GdnfP48540 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms