Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TgfaP48030 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
TgfaP48030 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
TgfaP48030 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.72□□□□□ -0.69
TgfaP48030 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
TgfaP48030 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC10.72□□□□□ -0.69
TgfaP48030 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
TgfaP48030 Gm25072-201ENSMUST00000175233 235 ntBASIC10.72□□□□□ -0.69
TgfaP48030 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
TgfaP48030 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
TgfaP48030 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.72□□□□□ -0.69
TgfaP48030 Gm7395-201ENSMUST00000216059 1045 ntBASIC10.72□□□□□ -0.69
TgfaP48030 Gm4797-201ENSMUST00000219075 1283 ntBASIC10.72□□□□□ -0.69
TgfaP48030 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.72□□□□□ -0.69
TgfaP48030 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
TgfaP48030 AC171241.1-201ENSMUST00000228144 1166 ntBASIC10.72□□□□□ -0.69
TgfaP48030 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
TgfaP48030 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
TgfaP48030 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TgfaP48030 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
TgfaP48030 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
TgfaP48030 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TgfaP48030 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TgfaP48030 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
TgfaP48030 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.72□□□□□ -0.69
TgfaP48030 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.72□□□□□ -0.69
TgfaP48030 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
TgfaP48030 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
TgfaP48030 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
TgfaP48030 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TgfaP48030 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
TgfaP48030 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
TgfaP48030 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.72□□□□□ -0.69
TgfaP48030 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.72□□□□□ -0.69
TgfaP48030 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
TgfaP48030 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
TgfaP48030 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
TgfaP48030 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
TgfaP48030 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
TgfaP48030 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TgfaP48030 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
TgfaP48030 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TgfaP48030 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
TgfaP48030 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
TgfaP48030 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
TgfaP48030 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
TgfaP48030 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
TgfaP48030 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TgfaP48030 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
TgfaP48030 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.71□□□□□ -0.69
TgfaP48030 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.71□□□□□ -0.69
TgfaP48030 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
TgfaP48030 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TgfaP48030 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
TgfaP48030 Gm11246-201ENSMUST00000120880 345 ntBASIC10.71□□□□□ -0.69
TgfaP48030 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC10.71□□□□□ -0.69
TgfaP48030 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
TgfaP48030 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC10.71□□□□□ -0.69
TgfaP48030 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
TgfaP48030 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TgfaP48030 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
TgfaP48030 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
TgfaP48030 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC10.71□□□□□ -0.69
TgfaP48030 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC10.71□□□□□ -0.69
TgfaP48030 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.71□□□□□ -0.69
TgfaP48030 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
TgfaP48030 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
TgfaP48030 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
TgfaP48030 Gm17831-201ENSMUST00000205579 900 ntBASIC10.71□□□□□ -0.69
TgfaP48030 AC099645.1-201ENSMUST00000226476 1105 ntBASIC10.71□□□□□ -0.69
TgfaP48030 Matn2-206ENSMUST00000228570 2798 ntBASIC10.71□□□□□ -0.69
TgfaP48030 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
TgfaP48030 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TgfaP48030 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TgfaP48030 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TgfaP48030 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TgfaP48030 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC10.71□□□□□ -0.69
TgfaP48030 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TgfaP48030 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TgfaP48030 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
TgfaP48030 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
TgfaP48030 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.7
TgfaP48030 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.7
TgfaP48030 AC167013.2-201ENSMUST00000228520 2684 ntBASIC10.71□□□□□ -0.7
TgfaP48030 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.7
TgfaP48030 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
TgfaP48030 Gm5639-201ENSMUST00000122305 2403 ntBASIC10.7□□□□□ -0.7
TgfaP48030 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
TgfaP48030 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
TgfaP48030 CT030684.3-201ENSMUST00000227308 2445 ntBASIC10.7□□□□□ -0.7
TgfaP48030 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
TgfaP48030 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
TgfaP48030 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC10.7□□□□□ -0.7
TgfaP48030 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
TgfaP48030 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
TgfaP48030 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC10.7□□□□□ -0.7
TgfaP48030 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
TgfaP48030 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
TgfaP48030 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
TgfaP48030 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms