Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vps4bP46467 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vps4bP46467 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vps4bP46467 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Vps4bP46467 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Vps4bP46467 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vps4bP46467 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.52□□□□□ -0.4
Vps4bP46467 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.52□□□□□ -0.4
Vps4bP46467 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Vps4bP46467 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Vps4bP46467 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Vps4bP46467 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Vps4bP46467 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vps4bP46467 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Vps4bP46467 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.52□□□□□ -0.41
Vps4bP46467 Gm12502-201ENSMUST00000120197 444 ntBASIC12.52□□□□□ -0.41
Vps4bP46467 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.52□□□□□ -0.41
Vps4bP46467 Gm5370-201ENSMUST00000187187 574 ntBASIC12.52□□□□□ -0.41
Vps4bP46467 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.52□□□□□ -0.41
Vps4bP46467 Gm45925-201ENSMUST00000218882 744 ntBASIC12.52□□□□□ -0.41
Vps4bP46467 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Vps4bP46467 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vps4bP46467 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vps4bP46467 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vps4bP46467 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vps4bP46467 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Vps4bP46467 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Vps4bP46467 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.52□□□□□ -0.41
Vps4bP46467 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.52□□□□□ -0.41
Vps4bP46467 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.52□□□□□ -0.41
Vps4bP46467 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Vps4bP46467 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.52□□□□□ -0.41
Vps4bP46467 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Vps4bP46467 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vps4bP46467 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vps4bP46467 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vps4bP46467 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Vps4bP46467 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Vps4bP46467 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Vps4bP46467 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vps4bP46467 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Vps4bP46467 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vps4bP46467 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Vps4bP46467 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vps4bP46467 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps4bP46467 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps4bP46467 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps4bP46467 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps4bP46467 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Vps4bP46467 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.51□□□□□ -0.41
Vps4bP46467 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.51□□□□□ -0.41
Vps4bP46467 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps4bP46467 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.51□□□□□ -0.41
Vps4bP46467 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps4bP46467 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.51□□□□□ -0.41
Vps4bP46467 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vps4bP46467 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vps4bP46467 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps4bP46467 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Vps4bP46467 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Vps4bP46467 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.51□□□□□ -0.41
Vps4bP46467 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.51□□□□□ -0.41
Vps4bP46467 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.51□□□□□ -0.41
Vps4bP46467 Gm11597-201ENSMUST00000121423 964 ntBASIC12.51□□□□□ -0.41
Vps4bP46467 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vps4bP46467 Mir3102-201ENSMUST00000175555 104 ntBASIC12.51□□□□□ -0.41
Vps4bP46467 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.51□□□□□ -0.41
Vps4bP46467 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.51□□□□□ -0.41
Vps4bP46467 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps4bP46467 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.51□□□□□ -0.41
Vps4bP46467 Gm7399-201ENSMUST00000032395 858 ntBASIC12.51□□□□□ -0.41
Vps4bP46467 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Vps4bP46467 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.51□□□□□ -0.41
Vps4bP46467 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps4bP46467 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.51□□□□□ -0.41
Vps4bP46467 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vps4bP46467 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vps4bP46467 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps4bP46467 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps4bP46467 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps4bP46467 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.51□□□□□ -0.41
Vps4bP46467 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.51□□□□□ -0.41
Vps4bP46467 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps4bP46467 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.51□□□□□ -0.41
Vps4bP46467 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps4bP46467 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps4bP46467 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps4bP46467 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps4bP46467 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps4bP46467 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.5□□□□□ -0.41
Vps4bP46467 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.5□□□□□ -0.41
Vps4bP46467 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps4bP46467 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps4bP46467 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Vps4bP46467 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps4bP46467 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps4bP46467 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps4bP46467 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Vps4bP46467 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Vps4bP46467 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms