Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd9P40240 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd9P40240 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.16□□□□□ -0.46
Cd9P40240 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd9P40240 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd9P40240 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd9P40240 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cd9P40240 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.16□□□□□ -0.46
Cd9P40240 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd9P40240 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cd9P40240 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd9P40240 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.16□□□□□ -0.46
Cd9P40240 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd9P40240 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd9P40240 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cd9P40240 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd9P40240 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd9P40240 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd9P40240 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cd9P40240 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd9P40240 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cd9P40240 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd9P40240 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd9P40240 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Cd9P40240 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.15□□□□□ -0.46
Cd9P40240 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd9P40240 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd9P40240 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.15□□□□□ -0.46
Cd9P40240 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.15□□□□□ -0.46
Cd9P40240 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.15□□□□□ -0.46
Cd9P40240 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd9P40240 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd9P40240 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.15□□□□□ -0.46
Cd9P40240 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.15□□□□□ -0.46
Cd9P40240 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.15□□□□□ -0.46
Cd9P40240 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.15□□□□□ -0.46
Cd9P40240 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.15□□□□□ -0.46
Cd9P40240 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cd9P40240 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.15□□□□□ -0.46
Cd9P40240 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Cd9P40240 Gm27501-201ENSMUST00000183599 107 ntBASIC12.15□□□□□ -0.46
Cd9P40240 Gm27572-201ENSMUST00000183702 255 ntBASIC12.15□□□□□ -0.46
Cd9P40240 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.15□□□□□ -0.46
Cd9P40240 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.15□□□□□ -0.46
Cd9P40240 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cd9P40240 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.15□□□□□ -0.46
Cd9P40240 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cd9P40240 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.15□□□□□ -0.46
Cd9P40240 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd9P40240 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd9P40240 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd9P40240 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd9P40240 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd9P40240 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cd9P40240 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd9P40240 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd9P40240 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cd9P40240 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.15□□□□□ -0.46
Cd9P40240 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.15□□□□□ -0.46
Cd9P40240 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cd9P40240 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cd9P40240 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd9P40240 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd9P40240 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.14□□□□□ -0.47
Cd9P40240 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd9P40240 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd9P40240 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.14□□□□□ -0.47
Cd9P40240 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.14□□□□□ -0.47
Cd9P40240 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.14□□□□□ -0.47
Cd9P40240 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.14□□□□□ -0.47
Cd9P40240 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd9P40240 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd9P40240 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Cd9P40240 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.14□□□□□ -0.47
Cd9P40240 Gm15370-201ENSMUST00000117158 253 ntBASIC12.14□□□□□ -0.47
Cd9P40240 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.14□□□□□ -0.47
Cd9P40240 Gm14726-201ENSMUST00000120623 896 ntBASIC12.14□□□□□ -0.47
Cd9P40240 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd9P40240 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cd9P40240 Gm26956-201ENSMUST00000182176 986 ntBASIC12.14□□□□□ -0.47
Cd9P40240 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.14□□□□□ -0.47
Cd9P40240 Gm38241-201ENSMUST00000192641 898 ntBASIC12.14□□□□□ -0.47
Cd9P40240 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.14□□□□□ -0.47
Cd9P40240 Gm10608-202ENSMUST00000213924 676 ntBASIC12.14□□□□□ -0.47
Cd9P40240 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.14□□□□□ -0.47
Cd9P40240 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.14□□□□□ -0.47
Cd9P40240 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.14□□□□□ -0.47
Cd9P40240 Gm8712-201ENSMUST00000221090 701 ntBASIC12.14□□□□□ -0.47
Cd9P40240 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.14□□□□□ -0.47
Cd9P40240 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd9P40240 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cd9P40240 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.14□□□□□ -0.47
Cd9P40240 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cd9P40240 Map1b-203ENSMUST00000223725 2669 ntBASIC12.14□□□□□ -0.47
Cd9P40240 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd9P40240 Matn2-203ENSMUST00000226766 3252 ntBASIC12.14□□□□□ -0.47
Cd9P40240 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd9P40240 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cd9P40240 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd9P40240 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms