Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Timp3P39876 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Timp3P39876 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Timp3P39876 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC10.15□□□□□ -0.78
Timp3P39876 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Timp3P39876 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
Timp3P39876 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Timp3P39876 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Timp3P39876 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Timp3P39876 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC10.15□□□□□ -0.78
Timp3P39876 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Timp3P39876 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Timp3P39876 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Timp3P39876 Gm4819-201ENSMUST00000182170 1009 ntBASIC10.15□□□□□ -0.78
Timp3P39876 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.15□□□□□ -0.78
Timp3P39876 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC10.15□□□□□ -0.78
Timp3P39876 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Timp3P39876 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10.15□□□□□ -0.78
Timp3P39876 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Timp3P39876 AC159747.1-201ENSMUST00000219903 265 ntBASIC10.15□□□□□ -0.78
Timp3P39876 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Timp3P39876 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.15□□□□□ -0.78
Timp3P39876 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Timp3P39876 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Timp3P39876 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Timp3P39876 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Timp3P39876 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Timp3P39876 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.15□□□□□ -0.78
Timp3P39876 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.15□□□□□ -0.78
Timp3P39876 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Timp3P39876 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Timp3P39876 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Timp3P39876 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Timp3P39876 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Timp3P39876 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Timp3P39876 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Timp3P39876 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Timp3P39876 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Timp3P39876 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC10.15□□□□□ -0.78
Timp3P39876 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.15□□□□□ -0.78
Timp3P39876 Gm10782-202ENSMUST00000223775 1480 ntBASIC10.15□□□□□ -0.78
Timp3P39876 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Timp3P39876 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Timp3P39876 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.79
Timp3P39876 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Timp3P39876 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Timp3P39876 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
Timp3P39876 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Timp3P39876 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.15□□□□□ -0.79
Timp3P39876 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Timp3P39876 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
Timp3P39876 AC123738.2-201ENSMUST00000223791 1899 ntBASIC10.15□□□□□ -0.79
Timp3P39876 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Timp3P39876 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Timp3P39876 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Timp3P39876 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Timp3P39876 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Timp3P39876 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Timp3P39876 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Timp3P39876 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Timp3P39876 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Timp3P39876 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Timp3P39876 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Timp3P39876 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Timp3P39876 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC10.14□□□□□ -0.79
Timp3P39876 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Timp3P39876 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Timp3P39876 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Timp3P39876 Gm24830-201ENSMUST00000102024 166 ntBASIC10.14□□□□□ -0.79
Timp3P39876 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Timp3P39876 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Timp3P39876 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Timp3P39876 Gm11930-201ENSMUST00000117788 190 ntBASIC10.14□□□□□ -0.79
Timp3P39876 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.14□□□□□ -0.79
Timp3P39876 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Timp3P39876 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC10.14□□□□□ -0.79
Timp3P39876 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC10.14□□□□□ -0.79
Timp3P39876 Gm25890-201ENSMUST00000177643 165 ntBASIC10.14□□□□□ -0.79
Timp3P39876 Rnu1b2-201ENSMUST00000178073 165 ntBASIC10.14□□□□□ -0.79
Timp3P39876 Rnu1b1-201ENSMUST00000178250 165 ntBASIC10.14□□□□□ -0.79
Timp3P39876 Gm22614-201ENSMUST00000178300 165 ntBASIC10.14□□□□□ -0.79
Timp3P39876 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Timp3P39876 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Timp3P39876 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Timp3P39876 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Timp3P39876 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Timp3P39876 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Timp3P39876 Gm22042-201ENSMUST00000082989 165 ntBASIC10.14□□□□□ -0.79
Timp3P39876 Gm26232-201ENSMUST00000083360 166 ntBASIC10.14□□□□□ -0.79
Timp3P39876 Gm24136-201ENSMUST00000083374 165 ntBASIC10.14□□□□□ -0.79
Timp3P39876 Gm22058-201ENSMUST00000083393 310 ntBASIC10.14□□□□□ -0.79
Timp3P39876 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.14□□□□□ -0.79
Timp3P39876 Gm26110-201ENSMUST00000083971 165 ntBASIC10.14□□□□□ -0.79
Timp3P39876 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.14□□□□□ -0.79
Timp3P39876 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.14□□□□□ -0.79
Timp3P39876 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Timp3P39876 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Timp3P39876 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Timp3P39876 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Timp3P39876 AC129336.1-201ENSMUST00000220224 2277 ntBASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms