Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Traf1P39428 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Traf1P39428 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Traf1P39428 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC14.3□□□□□ -0.12
Traf1P39428 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Traf1P39428 Crry-ps-201ENSMUST00000079090 1309 ntBASIC14.3□□□□□ -0.12
Traf1P39428 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Traf1P39428 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Traf1P39428 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Traf1P39428 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Traf1P39428 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Traf1P39428 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Traf1P39428 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Traf1P39428 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Traf1P39428 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Traf1P39428 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Traf1P39428 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Traf1P39428 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Traf1P39428 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Traf1P39428 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Traf1P39428 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf1P39428 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.29□□□□□ -0.12
Traf1P39428 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Traf1P39428 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf1P39428 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf1P39428 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf1P39428 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.29□□□□□ -0.12
Traf1P39428 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf1P39428 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf1P39428 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.29□□□□□ -0.12
Traf1P39428 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf1P39428 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.29□□□□□ -0.12
Traf1P39428 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf1P39428 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf1P39428 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Traf1P39428 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Traf1P39428 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf1P39428 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf1P39428 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC14.29□□□□□ -0.12
Traf1P39428 Gm7857-201ENSMUST00000117957 358 ntBASIC14.29□□□□□ -0.12
Traf1P39428 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.29□□□□□ -0.12
Traf1P39428 Mir5132-201ENSMUST00000175166 71 ntBASIC14.29□□□□□ -0.12
Traf1P39428 Gm9022-201ENSMUST00000182482 992 ntBASIC14.29□□□□□ -0.12
Traf1P39428 Gm18753-201ENSMUST00000201000 566 ntBASIC14.29□□□□□ -0.12
Traf1P39428 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.29□□□□□ -0.12
Traf1P39428 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC14.29□□□□□ -0.12
Traf1P39428 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.29□□□□□ -0.12
Traf1P39428 Gm9996-201ENSMUST00000070359 913 ntBASIC14.29□□□□□ -0.12
Traf1P39428 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Traf1P39428 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.29□□□□□ -0.12
Traf1P39428 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.29□□□□□ -0.12
Traf1P39428 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf1P39428 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Traf1P39428 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Traf1P39428 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Traf1P39428 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
Traf1P39428 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Traf1P39428 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf1P39428 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf1P39428 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf1P39428 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Traf1P39428 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf1P39428 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Traf1P39428 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf1P39428 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Traf1P39428 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Traf1P39428 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf1P39428 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf1P39428 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Traf1P39428 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf1P39428 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Traf1P39428 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Traf1P39428 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.28□□□□□ -0.12
Traf1P39428 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Traf1P39428 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Traf1P39428 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Traf1P39428 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Traf1P39428 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Traf1P39428 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Traf1P39428 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Traf1P39428 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC14.28□□□□□ -0.12
Traf1P39428 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Traf1P39428 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Traf1P39428 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Traf1P39428 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Traf1P39428 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Traf1P39428 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Traf1P39428 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Traf1P39428 Gm42937-201ENSMUST00000197360 752 ntBASIC14.28□□□□□ -0.12
Traf1P39428 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Traf1P39428 Gm8913-201ENSMUST00000209491 641 ntBASIC14.28□□□□□ -0.12
Traf1P39428 AC155637.1-201ENSMUST00000218560 636 ntBASIC14.28□□□□□ -0.12
Traf1P39428 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.28□□□□□ -0.12
Traf1P39428 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC14.28□□□□□ -0.12
Traf1P39428 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Traf1P39428 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.28□□□□□ -0.12
Traf1P39428 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.28□□□□□ -0.12
Traf1P39428 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Traf1P39428 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Traf1P39428 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms