Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC15.9■□□□□ 0.14
Col18a1P39061 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC15.9■□□□□ 0.14
Col18a1P39061 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col18a1P39061 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col18a1P39061 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col18a1P39061 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col18a1P39061 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col18a1P39061 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC15.9■□□□□ 0.14
Col18a1P39061 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col18a1P39061 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col18a1P39061 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col18a1P39061 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col18a1P39061 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC15.9■□□□□ 0.14
Col18a1P39061 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC15.9■□□□□ 0.14
Col18a1P39061 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC15.9■□□□□ 0.14
Col18a1P39061 Gm18123-201ENSMUST00000210874 822 ntBASIC15.9■□□□□ 0.14
Col18a1P39061 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col18a1P39061 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Col18a1P39061 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
Col18a1P39061 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col18a1P39061 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Col18a1P39061 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col18a1P39061 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col18a1P39061 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col18a1P39061 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Col18a1P39061 Gm44152-201ENSMUST00000205007 1691 ntBASIC15.89■□□□□ 0.14
Col18a1P39061 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC15.89■□□□□ 0.14
Col18a1P39061 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col18a1P39061 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col18a1P39061 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.89■□□□□ 0.13
Col18a1P39061 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Col18a1P39061 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col18a1P39061 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col18a1P39061 Gm38089-201ENSMUST00000193585 1514 ntBASIC15.89■□□□□ 0.13
Col18a1P39061 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Col18a1P39061 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col18a1P39061 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Col18a1P39061 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC15.89■□□□□ 0.13
Col18a1P39061 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC15.89■□□□□ 0.13
Col18a1P39061 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC15.89■□□□□ 0.13
Col18a1P39061 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Col18a1P39061 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Col18a1P39061 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC15.89■□□□□ 0.13
Col18a1P39061 Mir7051-201ENSMUST00000184167 73 ntBASIC15.89■□□□□ 0.13
Col18a1P39061 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Col18a1P39061 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC15.89■□□□□ 0.13
Col18a1P39061 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC15.89■□□□□ 0.13
Col18a1P39061 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC15.89■□□□□ 0.13
Col18a1P39061 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.89■□□□□ 0.13
Col18a1P39061 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col18a1P39061 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Col18a1P39061 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col18a1P39061 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col18a1P39061 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Col18a1P39061 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col18a1P39061 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col18a1P39061 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Col18a1P39061 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col18a1P39061 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col18a1P39061 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col18a1P39061 Gm11475-201ENSMUST00000118482 476 ntBASIC15.88■□□□□ 0.13
Col18a1P39061 Gm13422-201ENSMUST00000118834 504 ntBASIC15.88■□□□□ 0.13
Col18a1P39061 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC15.88■□□□□ 0.13
Col18a1P39061 Gm14165-201ENSMUST00000121456 952 ntBASIC15.88■□□□□ 0.13
Col18a1P39061 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC15.88■□□□□ 0.13
Col18a1P39061 Gm16547-201ENSMUST00000159474 293 ntBASIC15.88■□□□□ 0.13
Col18a1P39061 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC15.88■□□□□ 0.13
Col18a1P39061 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC15.88■□□□□ 0.13
Col18a1P39061 Gm44323-201ENSMUST00000198689 129 ntBASIC15.88■□□□□ 0.13
Col18a1P39061 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC15.88■□□□□ 0.13
Col18a1P39061 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC15.88■□□□□ 0.13
Col18a1P39061 Gm7939-201ENSMUST00000201233 1050 ntBASIC15.88■□□□□ 0.13
Col18a1P39061 BC080696-201ENSMUST00000202858 1218 ntBASIC15.88■□□□□ 0.13
Col18a1P39061 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col18a1P39061 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Col18a1P39061 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col18a1P39061 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col18a1P39061 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col18a1P39061 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col18a1P39061 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col18a1P39061 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col18a1P39061 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC15.88■□□□□ 0.13
Col18a1P39061 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Col18a1P39061 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col18a1P39061 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col18a1P39061 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Col18a1P39061 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col18a1P39061 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col18a1P39061 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col18a1P39061 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col18a1P39061 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col18a1P39061 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Col18a1P39061 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col18a1P39061 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col18a1P39061 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col18a1P39061 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col18a1P39061 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col18a1P39061 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col18a1P39061 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC15.87■□□□□ 0.13
Col18a1P39061 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms