Protein–RNA interactions for Protein: P35822

Ptprk, Receptor-type tyrosine-protein phosphatase kappa, mousemouse

Predictions only

Length 1,457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtprkP35822 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PtprkP35822 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PtprkP35822 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PtprkP35822 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PtprkP35822 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC19.26■□□□□ 0.67
PtprkP35822 Gm3017-201ENSMUST00000203603 1126 ntBASIC19.26■□□□□ 0.67
PtprkP35822 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PtprkP35822 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PtprkP35822 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
PtprkP35822 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PtprkP35822 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PtprkP35822 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.26■□□□□ 0.67
PtprkP35822 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PtprkP35822 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PtprkP35822 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PtprkP35822 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PtprkP35822 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PtprkP35822 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PtprkP35822 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PtprkP35822 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PtprkP35822 Gm44414-201ENSMUST00000203660 2109 ntBASIC19.25■□□□□ 0.67
PtprkP35822 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PtprkP35822 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PtprkP35822 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PtprkP35822 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PtprkP35822 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC19.25■□□□□ 0.67
PtprkP35822 Gm9507-202ENSMUST00000180157 654 ntBASIC19.25■□□□□ 0.67
PtprkP35822 Gm18041-201ENSMUST00000218210 618 ntBASIC19.25■□□□□ 0.67
PtprkP35822 AC154572.1-201ENSMUST00000226098 1204 ntBASIC19.25■□□□□ 0.67
PtprkP35822 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PtprkP35822 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PtprkP35822 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PtprkP35822 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PtprkP35822 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PtprkP35822 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PtprkP35822 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PtprkP35822 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC19.25■□□□□ 0.67
PtprkP35822 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PtprkP35822 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PtprkP35822 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PtprkP35822 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PtprkP35822 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PtprkP35822 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PtprkP35822 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC19.24■□□□□ 0.67
PtprkP35822 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PtprkP35822 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PtprkP35822 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PtprkP35822 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PtprkP35822 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC19.24■□□□□ 0.67
PtprkP35822 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
PtprkP35822 Gm25998-201ENSMUST00000175397 53 ntBASIC19.24■□□□□ 0.67
PtprkP35822 Gm9136-201ENSMUST00000193368 454 ntBASIC19.24■□□□□ 0.67
PtprkP35822 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PtprkP35822 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PtprkP35822 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PtprkP35822 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PtprkP35822 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
PtprkP35822 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PtprkP35822 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PtprkP35822 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC19.24■□□□□ 0.67
PtprkP35822 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PtprkP35822 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PtprkP35822 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC19.24■□□□□ 0.67
PtprkP35822 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PtprkP35822 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PtprkP35822 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PtprkP35822 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PtprkP35822 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PtprkP35822 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC19.23■□□□□ 0.67
PtprkP35822 Gm22146-201ENSMUST00000157397 288 ntBASIC19.23■□□□□ 0.67
PtprkP35822 Gm9630-201ENSMUST00000178304 885 ntBASIC19.23■□□□□ 0.67
PtprkP35822 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PtprkP35822 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC19.23■□□□□ 0.67
PtprkP35822 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PtprkP35822 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC19.23■□□□□ 0.67
PtprkP35822 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PtprkP35822 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PtprkP35822 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC19.23■□□□□ 0.67
PtprkP35822 Gm5451-201ENSMUST00000080545 579 ntBASIC19.23■□□□□ 0.67
PtprkP35822 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PtprkP35822 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PtprkP35822 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PtprkP35822 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PtprkP35822 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC19.23■□□□□ 0.67
PtprkP35822 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
PtprkP35822 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PtprkP35822 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC19.23■□□□□ 0.67
PtprkP35822 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PtprkP35822 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PtprkP35822 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PtprkP35822 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC19.22■□□□□ 0.67
PtprkP35822 Gm7150-201ENSMUST00000122032 981 ntBASIC19.22■□□□□ 0.67
PtprkP35822 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PtprkP35822 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PtprkP35822 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC19.22■□□□□ 0.67
PtprkP35822 Gm5870-201ENSMUST00000196461 282 ntBASIC19.22■□□□□ 0.67
PtprkP35822 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PtprkP35822 Gm29763-201ENSMUST00000205306 616 ntBASIC19.22■□□□□ 0.67
PtprkP35822 Gm6855-201ENSMUST00000206307 790 ntBASIC19.22■□□□□ 0.67
PtprkP35822 Gm7940-201ENSMUST00000218195 769 ntBASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms