Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rfc1P35601 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rfc1P35601 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rfc1P35601 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC13□□□□□ -0.33
Rfc1P35601 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13□□□□□ -0.33
Rfc1P35601 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rfc1P35601 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfc1P35601 Gm9466-201ENSMUST00000218144 2246 ntBASIC13□□□□□ -0.33
Rfc1P35601 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfc1P35601 Gm43172-201ENSMUST00000202139 2137 ntBASIC13□□□□□ -0.33
Rfc1P35601 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfc1P35601 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rfc1P35601 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rfc1P35601 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfc1P35601 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rfc1P35601 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfc1P35601 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC13□□□□□ -0.33
Rfc1P35601 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rfc1P35601 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rfc1P35601 Gm5303-201ENSMUST00000117943 1252 ntBASIC13□□□□□ -0.33
Rfc1P35601 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rfc1P35601 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfc1P35601 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rfc1P35601 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rfc1P35601 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Rfc1P35601 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rfc1P35601 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfc1P35601 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rfc1P35601 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfc1P35601 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13□□□□□ -0.33
Rfc1P35601 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Rfc1P35601 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rfc1P35601 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13□□□□□ -0.33
Rfc1P35601 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfc1P35601 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfc1P35601 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Rfc1P35601 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rfc1P35601 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rfc1P35601 Abhd6-203ENSMUST00000225234 1958 ntBASIC13□□□□□ -0.33
Rfc1P35601 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfc1P35601 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfc1P35601 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Rfc1P35601 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rfc1P35601 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfc1P35601 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Rfc1P35601 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rfc1P35601 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rfc1P35601 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rfc1P35601 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfc1P35601 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfc1P35601 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.99□□□□□ -0.33
Rfc1P35601 Gm12859-201ENSMUST00000117834 427 ntBASIC12.99□□□□□ -0.33
Rfc1P35601 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.99□□□□□ -0.33
Rfc1P35601 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Rfc1P35601 Gm9630-201ENSMUST00000178304 885 ntBASIC12.99□□□□□ -0.33
Rfc1P35601 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Rfc1P35601 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Rfc1P35601 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfc1P35601 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Rfc1P35601 Gm18307-201ENSMUST00000206864 949 ntBASIC12.99□□□□□ -0.33
Rfc1P35601 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.99□□□□□ -0.33
Rfc1P35601 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.99□□□□□ -0.33
Rfc1P35601 Gm18624-201ENSMUST00000220966 658 ntBASIC12.99□□□□□ -0.33
Rfc1P35601 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.99□□□□□ -0.33
Rfc1P35601 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfc1P35601 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rfc1P35601 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rfc1P35601 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rfc1P35601 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rfc1P35601 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfc1P35601 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfc1P35601 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Rfc1P35601 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rfc1P35601 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Rfc1P35601 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfc1P35601 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfc1P35601 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.99□□□□□ -0.33
Rfc1P35601 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfc1P35601 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfc1P35601 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rfc1P35601 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rfc1P35601 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rfc1P35601 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfc1P35601 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.98□□□□□ -0.33
Rfc1P35601 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfc1P35601 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfc1P35601 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfc1P35601 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfc1P35601 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfc1P35601 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfc1P35601 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfc1P35601 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.98□□□□□ -0.33
Rfc1P35601 Gm11978-201ENSMUST00000122315 466 ntBASIC12.98□□□□□ -0.33
Rfc1P35601 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.98□□□□□ -0.33
Rfc1P35601 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.98□□□□□ -0.33
Rfc1P35601 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Rfc1P35601 Mir7654-201ENSMUST00000185082 70 ntBASIC12.98□□□□□ -0.33
Rfc1P35601 Gm37917-201ENSMUST00000194711 392 ntBASIC12.98□□□□□ -0.33
Rfc1P35601 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.98□□□□□ -0.33
Rfc1P35601 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms