Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Rom1P32958 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC9.73□□□□□ -0.85
Rom1P32958 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Rom1P32958 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC9.73□□□□□ -0.85
Rom1P32958 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rom1P32958 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rom1P32958 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rom1P32958 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Rom1P32958 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
Rom1P32958 Gm12036-201ENSMUST00000120008 530 ntBASIC9.73□□□□□ -0.85
Rom1P32958 Gm11637-201ENSMUST00000120601 592 ntBASIC9.73□□□□□ -0.85
Rom1P32958 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC9.73□□□□□ -0.85
Rom1P32958 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Rom1P32958 Gm24694-201ENSMUST00000180054 110 ntBASIC9.73□□□□□ -0.85
Rom1P32958 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC9.73□□□□□ -0.85
Rom1P32958 Gm27306-201ENSMUST00000183970 107 ntBASIC9.73□□□□□ -0.85
Rom1P32958 Gm27663-201ENSMUST00000184839 110 ntBASIC9.73□□□□□ -0.85
Rom1P32958 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC9.73□□□□□ -0.85
Rom1P32958 Gm29667-201ENSMUST00000190817 490 ntBASIC9.73□□□□□ -0.85
Rom1P32958 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC9.73□□□□□ -0.85
Rom1P32958 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rom1P32958 Gm42929-201ENSMUST00000198374 1286 ntBASIC9.73□□□□□ -0.85
Rom1P32958 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC9.73□□□□□ -0.85
Rom1P32958 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Rom1P32958 Gm18307-201ENSMUST00000206864 949 ntBASIC9.73□□□□□ -0.85
Rom1P32958 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC9.73□□□□□ -0.85
Rom1P32958 AC130671.1-201ENSMUST00000227384 1237 ntBASIC9.73□□□□□ -0.85
Rom1P32958 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC9.73□□□□□ -0.85
Rom1P32958 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rom1P32958 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rom1P32958 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rom1P32958 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rom1P32958 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rom1P32958 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rom1P32958 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rom1P32958 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC9.73□□□□□ -0.85
Rom1P32958 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rom1P32958 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rom1P32958 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rom1P32958 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rom1P32958 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rom1P32958 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rom1P32958 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
Rom1P32958 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Rom1P32958 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rom1P32958 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rom1P32958 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC9.72□□□□□ -0.85
Rom1P32958 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rom1P32958 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rom1P32958 AC126257.2-201ENSMUST00000215507 2300 ntBASIC9.72□□□□□ -0.85
Rom1P32958 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rom1P32958 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rom1P32958 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rom1P32958 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC9.72□□□□□ -0.85
Rom1P32958 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Rom1P32958 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC9.72□□□□□ -0.85
Rom1P32958 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC9.72□□□□□ -0.85
Rom1P32958 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rom1P32958 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC9.72□□□□□ -0.85
Rom1P32958 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Rom1P32958 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rom1P32958 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rom1P32958 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rom1P32958 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rom1P32958 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Rom1P32958 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Rom1P32958 Gm2213-201ENSMUST00000197485 688 ntBASIC9.72□□□□□ -0.85
Rom1P32958 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC9.72□□□□□ -0.85
Rom1P32958 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Rom1P32958 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
Rom1P32958 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Rom1P32958 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC9.72□□□□□ -0.85
Rom1P32958 AC124732.1-201ENSMUST00000221551 910 ntBASIC9.72□□□□□ -0.85
Rom1P32958 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rom1P32958 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rom1P32958 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rom1P32958 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rom1P32958 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Rom1P32958 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Rom1P32958 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rom1P32958 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rom1P32958 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC9.72□□□□□ -0.85
Rom1P32958 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rom1P32958 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rom1P32958 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Rom1P32958 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Rom1P32958 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Rom1P32958 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rom1P32958 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Rom1P32958 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Rom1P32958 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Rom1P32958 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rom1P32958 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rom1P32958 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rom1P32958 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Rom1P32958 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rom1P32958 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Rom1P32958 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rom1P32958 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC9.71□□□□□ -0.85
Rom1P32958 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms