Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nckap1P28660 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Nckap1P28660 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nckap1P28660 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.31□□□□□ -0.44
Nckap1P28660 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nckap1P28660 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.31□□□□□ -0.44
Nckap1P28660 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.31□□□□□ -0.44
Nckap1P28660 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nckap1P28660 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.31□□□□□ -0.44
Nckap1P28660 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nckap1P28660 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nckap1P28660 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nckap1P28660 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Nckap1P28660 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Nckap1P28660 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nckap1P28660 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nckap1P28660 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Nckap1P28660 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nckap1P28660 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.31□□□□□ -0.44
Nckap1P28660 Gm9083-201ENSMUST00000120423 819 ntBASIC12.31□□□□□ -0.44
Nckap1P28660 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.31□□□□□ -0.44
Nckap1P28660 Gm22902-201ENSMUST00000158488 302 ntBASIC12.31□□□□□ -0.44
Nckap1P28660 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Nckap1P28660 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Nckap1P28660 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nckap1P28660 Gm42997-202ENSMUST00000200321 985 ntBASIC12.31□□□□□ -0.44
Nckap1P28660 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.31□□□□□ -0.44
Nckap1P28660 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.31□□□□□ -0.44
Nckap1P28660 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.31□□□□□ -0.44
Nckap1P28660 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.31□□□□□ -0.44
Nckap1P28660 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nckap1P28660 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nckap1P28660 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nckap1P28660 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nckap1P28660 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nckap1P28660 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nckap1P28660 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nckap1P28660 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nckap1P28660 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nckap1P28660 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nckap1P28660 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nckap1P28660 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nckap1P28660 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nckap1P28660 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nckap1P28660 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nckap1P28660 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nckap1P28660 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nckap1P28660 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nckap1P28660 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nckap1P28660 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.3□□□□□ -0.44
Nckap1P28660 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nckap1P28660 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nckap1P28660 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nckap1P28660 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nckap1P28660 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nckap1P28660 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
Nckap1P28660 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.3□□□□□ -0.44
Nckap1P28660 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nckap1P28660 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nckap1P28660 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nckap1P28660 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nckap1P28660 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nckap1P28660 Gm24934-201ENSMUST00000103764 111 ntBASIC12.3□□□□□ -0.44
Nckap1P28660 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.3□□□□□ -0.44
Nckap1P28660 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.3□□□□□ -0.44
Nckap1P28660 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Nckap1P28660 Gm28071-201ENSMUST00000190355 478 ntBASIC12.3□□□□□ -0.44
Nckap1P28660 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.3□□□□□ -0.44
Nckap1P28660 Gm37986-201ENSMUST00000193285 383 ntBASIC12.3□□□□□ -0.44
Nckap1P28660 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nckap1P28660 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nckap1P28660 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nckap1P28660 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nckap1P28660 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nckap1P28660 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nckap1P28660 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nckap1P28660 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nckap1P28660 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nckap1P28660 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nckap1P28660 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nckap1P28660 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nckap1P28660 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Nckap1P28660 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nckap1P28660 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.3□□□□□ -0.44
Nckap1P28660 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nckap1P28660 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.3□□□□□ -0.44
Nckap1P28660 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.3□□□□□ -0.44
Nckap1P28660 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Nckap1P28660 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.29□□□□□ -0.44
Nckap1P28660 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.29□□□□□ -0.44
Nckap1P28660 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nckap1P28660 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nckap1P28660 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nckap1P28660 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nckap1P28660 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.29□□□□□ -0.44
Nckap1P28660 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nckap1P28660 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nckap1P28660 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nckap1P28660 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nckap1P28660 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms