Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cd48P18181 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cd48P18181 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Cd48P18181 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cd48P18181 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cd48P18181 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cd48P18181 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.08□□□□□ -0.64
Cd48P18181 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cd48P18181 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cd48P18181 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cd48P18181 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cd48P18181 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cd48P18181 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Cd48P18181 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cd48P18181 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd48P18181 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.07□□□□□ -0.64
Cd48P18181 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd48P18181 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd48P18181 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cd48P18181 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd48P18181 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd48P18181 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cd48P18181 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cd48P18181 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd48P18181 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.07□□□□□ -0.64
Cd48P18181 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.07□□□□□ -0.64
Cd48P18181 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.07□□□□□ -0.64
Cd48P18181 Gm12490-201ENSMUST00000120255 560 ntBASIC11.07□□□□□ -0.64
Cd48P18181 Gm14760-201ENSMUST00000121831 999 ntBASIC11.07□□□□□ -0.64
Cd48P18181 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cd48P18181 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd48P18181 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Cd48P18181 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cd48P18181 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.07□□□□□ -0.64
Cd48P18181 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cd48P18181 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cd48P18181 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.07□□□□□ -0.64
Cd48P18181 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd48P18181 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cd48P18181 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd48P18181 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.07□□□□□ -0.64
Cd48P18181 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd48P18181 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd48P18181 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd48P18181 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cd48P18181 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd48P18181 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd48P18181 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Cd48P18181 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cd48P18181 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd48P18181 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd48P18181 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd48P18181 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd48P18181 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd48P18181 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cd48P18181 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.07□□□□□ -0.64
Cd48P18181 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd48P18181 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd48P18181 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Cd48P18181 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd48P18181 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd48P18181 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd48P18181 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cd48P18181 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd48P18181 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.06□□□□□ -0.64
Cd48P18181 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cd48P18181 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd48P18181 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd48P18181 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cd48P18181 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd48P18181 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd48P18181 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd48P18181 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Cd48P18181 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Cd48P18181 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd48P18181 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cd48P18181 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.06□□□□□ -0.64
Cd48P18181 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.06□□□□□ -0.64
Cd48P18181 Gm27839-201ENSMUST00000184242 106 ntBASIC11.06□□□□□ -0.64
Cd48P18181 Gm27390-201ENSMUST00000184516 176 ntBASIC11.06□□□□□ -0.64
Cd48P18181 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.06□□□□□ -0.64
Cd48P18181 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cd48P18181 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.06□□□□□ -0.64
Cd48P18181 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd48P18181 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd48P18181 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd48P18181 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cd48P18181 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.06□□□□□ -0.64
Cd48P18181 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cd48P18181 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.06□□□□□ -0.64
Cd48P18181 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd48P18181 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cd48P18181 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cd48P18181 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Cd48P18181 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cd48P18181 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd48P18181 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd48P18181 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cd48P18181 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cd48P18181 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms