Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.74□□□□□ -0.69
UbbP0CG49 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
UbbP0CG49 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
UbbP0CG49 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
UbbP0CG49 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
UbbP0CG49 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
UbbP0CG49 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
UbbP0CG49 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
UbbP0CG49 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UbbP0CG49 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
UbbP0CG49 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
UbbP0CG49 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
UbbP0CG49 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
UbbP0CG49 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.73□□□□□ -0.69
UbbP0CG49 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
UbbP0CG49 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
UbbP0CG49 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
UbbP0CG49 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
UbbP0CG49 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC10.73□□□□□ -0.69
UbbP0CG49 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC10.73□□□□□ -0.69
UbbP0CG49 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC10.73□□□□□ -0.69
UbbP0CG49 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
UbbP0CG49 Gm7287-201ENSMUST00000205267 602 ntBASIC10.73□□□□□ -0.69
UbbP0CG49 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
UbbP0CG49 Gm8598-201ENSMUST00000221184 836 ntBASIC10.73□□□□□ -0.69
UbbP0CG49 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UbbP0CG49 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UbbP0CG49 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
UbbP0CG49 Gm24526-201ENSMUST00000082921 158 ntBASIC10.73□□□□□ -0.69
UbbP0CG49 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UbbP0CG49 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
UbbP0CG49 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
UbbP0CG49 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UbbP0CG49 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UbbP0CG49 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UbbP0CG49 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
UbbP0CG49 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UbbP0CG49 Gm44775-201ENSMUST00000207266 1456 ntBASIC10.73□□□□□ -0.69
UbbP0CG49 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
UbbP0CG49 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UbbP0CG49 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UbbP0CG49 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
UbbP0CG49 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UbbP0CG49 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UbbP0CG49 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
UbbP0CG49 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
UbbP0CG49 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
UbbP0CG49 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UbbP0CG49 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UbbP0CG49 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UbbP0CG49 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
UbbP0CG49 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UbbP0CG49 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
UbbP0CG49 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
UbbP0CG49 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
UbbP0CG49 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UbbP0CG49 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.72□□□□□ -0.69
UbbP0CG49 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UbbP0CG49 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC10.72□□□□□ -0.69
UbbP0CG49 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC10.72□□□□□ -0.69
UbbP0CG49 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC10.72□□□□□ -0.69
UbbP0CG49 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC10.72□□□□□ -0.69
UbbP0CG49 Rmrp-201ENSMUST00000157463 271 ntBASIC10.72□□□□□ -0.69
UbbP0CG49 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UbbP0CG49 Gm28911-201ENSMUST00000188837 117 ntBASIC10.72□□□□□ -0.69
UbbP0CG49 Gm37497-201ENSMUST00000195830 798 ntBASIC10.72□□□□□ -0.69
UbbP0CG49 AL593843.1-201ENSMUST00000195891 145 ntBASIC10.72□□□□□ -0.69
UbbP0CG49 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC10.72□□□□□ -0.69
UbbP0CG49 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
UbbP0CG49 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC10.72□□□□□ -0.69
UbbP0CG49 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.72□□□□□ -0.69
UbbP0CG49 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UbbP0CG49 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
UbbP0CG49 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.72□□□□□ -0.69
UbbP0CG49 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.72□□□□□ -0.69
UbbP0CG49 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
UbbP0CG49 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
UbbP0CG49 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
UbbP0CG49 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UbbP0CG49 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
UbbP0CG49 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UbbP0CG49 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
UbbP0CG49 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UbbP0CG49 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
UbbP0CG49 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
UbbP0CG49 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
UbbP0CG49 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.72□□□□□ -0.69
UbbP0CG49 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
UbbP0CG49 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UbbP0CG49 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
UbbP0CG49 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.72□□□□□ -0.69
UbbP0CG49 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UbbP0CG49 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
UbbP0CG49 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UbbP0CG49 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
UbbP0CG49 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UbbP0CG49 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
UbbP0CG49 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
UbbP0CG49 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
UbbP0CG49 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms