Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Gm2991-201ENSMUST00000173338 480 ntBASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Gm7046-201ENSMUST00000221351 977 ntBASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp6P0C0A3 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp6P0C0A3 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp6P0C0A3 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp6P0C0A3 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
Chmp6P0C0A3 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp6P0C0A3 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp6P0C0A3 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp6P0C0A3 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp6P0C0A3 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp6P0C0A3 Gm13297-201ENSMUST00000120205 934 ntBASIC13.44□□□□□ -0.26
Chmp6P0C0A3 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.44□□□□□ -0.26
Chmp6P0C0A3 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp6P0C0A3 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.44□□□□□ -0.26
Chmp6P0C0A3 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.44□□□□□ -0.26
Chmp6P0C0A3 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.44□□□□□ -0.26
Chmp6P0C0A3 Mir8109-201ENSMUST00000184375 117 ntBASIC13.44□□□□□ -0.26
Chmp6P0C0A3 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.44□□□□□ -0.26
Chmp6P0C0A3 Gm43822-201ENSMUST00000200285 476 ntBASIC13.44□□□□□ -0.26
Chmp6P0C0A3 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.44□□□□□ -0.26
Chmp6P0C0A3 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp6P0C0A3 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp6P0C0A3 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp6P0C0A3 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp6P0C0A3 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Chmp6P0C0A3 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp6P0C0A3 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp6P0C0A3 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp6P0C0A3 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp6P0C0A3 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.44□□□□□ -0.26
Chmp6P0C0A3 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp6P0C0A3 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Chmp6P0C0A3 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp6P0C0A3 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
Chmp6P0C0A3 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Chmp6P0C0A3 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Gm2546-201ENSMUST00000182630 991 ntBASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp6P0C0A3 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms