Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Hoxd3P09027 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hoxd3P09027 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hoxd3P09027 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hoxd3P09027 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hoxd3P09027 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hoxd3P09027 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hoxd3P09027 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Hoxd3P09027 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hoxd3P09027 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hoxd3P09027 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
Hoxd3P09027 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC9.78□□□□□ -0.84
Hoxd3P09027 Mir1192-201ENSMUST00000116976 121 ntBASIC9.78□□□□□ -0.84
Hoxd3P09027 Gm13313-201ENSMUST00000118938 1084 ntBASIC9.78□□□□□ -0.84
Hoxd3P09027 Gm14726-201ENSMUST00000120623 896 ntBASIC9.78□□□□□ -0.84
Hoxd3P09027 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC9.78□□□□□ -0.84
Hoxd3P09027 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Hoxd3P09027 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Hoxd3P09027 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC9.78□□□□□ -0.84
Hoxd3P09027 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hoxd3P09027 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Hoxd3P09027 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Hoxd3P09027 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hoxd3P09027 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC9.78□□□□□ -0.84
Hoxd3P09027 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Hoxd3P09027 Gm19253-201ENSMUST00000204279 307 ntBASIC9.78□□□□□ -0.84
Hoxd3P09027 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC9.78□□□□□ -0.84
Hoxd3P09027 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC9.78□□□□□ -0.84
Hoxd3P09027 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC9.78□□□□□ -0.84
Hoxd3P09027 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Hoxd3P09027 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC9.78□□□□□ -0.84
Hoxd3P09027 Gm9004-201ENSMUST00000218739 1222 ntBASIC9.78□□□□□ -0.84
Hoxd3P09027 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hoxd3P09027 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Hoxd3P09027 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Hoxd3P09027 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Hoxd3P09027 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hoxd3P09027 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Hoxd3P09027 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hoxd3P09027 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC9.78□□□□□ -0.84
Hoxd3P09027 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Hoxd3P09027 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hoxd3P09027 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
Hoxd3P09027 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Hoxd3P09027 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Hoxd3P09027 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hoxd3P09027 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hoxd3P09027 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hoxd3P09027 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hoxd3P09027 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hoxd3P09027 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Hoxd3P09027 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Hoxd3P09027 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
Hoxd3P09027 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
Hoxd3P09027 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Hoxd3P09027 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
Hoxd3P09027 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC9.77□□□□□ -0.84
Hoxd3P09027 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Hoxd3P09027 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Hoxd3P09027 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Hoxd3P09027 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hoxd3P09027 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Hoxd3P09027 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
Hoxd3P09027 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hoxd3P09027 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC9.77□□□□□ -0.85
Hoxd3P09027 Mir466f-2-201ENSMUST00000104805 94 ntBASIC9.77□□□□□ -0.85
Hoxd3P09027 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hoxd3P09027 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Hoxd3P09027 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hoxd3P09027 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Hoxd3P09027 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hoxd3P09027 Gm25668-201ENSMUST00000157700 129 ntBASIC9.77□□□□□ -0.85
Hoxd3P09027 Gm16296-201ENSMUST00000159905 325 ntBASIC9.77□□□□□ -0.85
Hoxd3P09027 Gm16285-201ENSMUST00000162999 347 ntBASIC9.77□□□□□ -0.85
Hoxd3P09027 Gm17063-201ENSMUST00000168135 456 ntBASIC9.77□□□□□ -0.85
Hoxd3P09027 Gm8018-201ENSMUST00000173536 789 ntBASIC9.77□□□□□ -0.85
Hoxd3P09027 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC9.77□□□□□ -0.85
Hoxd3P09027 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC9.77□□□□□ -0.85
Hoxd3P09027 Ighv1-62-201ENSMUST00000193406 350 ntBASIC9.77□□□□□ -0.85
Hoxd3P09027 Gm31256-201ENSMUST00000194705 506 ntBASIC9.77□□□□□ -0.85
Hoxd3P09027 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC9.77□□□□□ -0.85
Hoxd3P09027 Gm43550-201ENSMUST00000200597 303 ntBASIC9.77□□□□□ -0.85
Hoxd3P09027 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC9.77□□□□□ -0.85
Hoxd3P09027 Gm44958-201ENSMUST00000203734 736 ntBASIC9.77□□□□□ -0.85
Hoxd3P09027 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Hoxd3P09027 Gm44760-201ENSMUST00000206375 1173 ntBASIC9.77□□□□□ -0.85
Hoxd3P09027 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC9.77□□□□□ -0.85
Hoxd3P09027 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC9.77□□□□□ -0.85
Hoxd3P09027 Gm7441-201ENSMUST00000220697 1074 ntBASIC9.77□□□□□ -0.85
Hoxd3P09027 AC122371.3-201ENSMUST00000223402 1061 ntBASIC9.77□□□□□ -0.85
Hoxd3P09027 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Hoxd3P09027 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hoxd3P09027 Speer4c-201ENSMUST00000095005 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hoxd3P09027 Speer4d-201ENSMUST00000095006 1194 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hoxd3P09027 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Hoxd3P09027 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hoxd3P09027 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hoxd3P09027 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hoxd3P09027 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC9.77□□□□□ -0.85
Hoxd3P09027 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms