Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
H3f3cP02301 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H3f3cP02301 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
H3f3cP02301 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.62□□□□□ -0.71
H3f3cP02301 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.62□□□□□ -0.71
H3f3cP02301 Gm13297-201ENSMUST00000120205 934 ntBASIC10.62□□□□□ -0.71
H3f3cP02301 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.62□□□□□ -0.71
H3f3cP02301 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.62□□□□□ -0.71
H3f3cP02301 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
H3f3cP02301 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.62□□□□□ -0.71
H3f3cP02301 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10.62□□□□□ -0.71
H3f3cP02301 Rmrp-201ENSMUST00000157463 271 ntBASIC10.62□□□□□ -0.71
H3f3cP02301 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
H3f3cP02301 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
H3f3cP02301 Gm29396-201ENSMUST00000185659 716 ntBASIC10.62□□□□□ -0.71
H3f3cP02301 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
H3f3cP02301 Olfr284-202ENSMUST00000206647 966 ntBASIC10.62□□□□□ -0.71
H3f3cP02301 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10.62□□□□□ -0.71
H3f3cP02301 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.62□□□□□ -0.71
H3f3cP02301 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10.62□□□□□ -0.71
H3f3cP02301 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
H3f3cP02301 AC125350.2-201ENSMUST00000224737 727 ntBASIC10.62□□□□□ -0.71
H3f3cP02301 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.62□□□□□ -0.71
H3f3cP02301 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.62□□□□□ -0.71
H3f3cP02301 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
H3f3cP02301 Gm7399-201ENSMUST00000032395 858 ntBASIC10.62□□□□□ -0.71
H3f3cP02301 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
H3f3cP02301 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
H3f3cP02301 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H3f3cP02301 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H3f3cP02301 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
H3f3cP02301 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
H3f3cP02301 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
H3f3cP02301 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.62□□□□□ -0.71
H3f3cP02301 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H3f3cP02301 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
H3f3cP02301 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H3f3cP02301 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H3f3cP02301 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H3f3cP02301 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
H3f3cP02301 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H3f3cP02301 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
H3f3cP02301 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
H3f3cP02301 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
H3f3cP02301 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
H3f3cP02301 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 Gm24231-201ENSMUST00000104315 133 ntBASIC10.61□□□□□ -0.71
H3f3cP02301 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
H3f3cP02301 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.61□□□□□ -0.71
H3f3cP02301 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 Gm27501-201ENSMUST00000183599 107 ntBASIC10.61□□□□□ -0.71
H3f3cP02301 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.61□□□□□ -0.71
H3f3cP02301 Gm9004-201ENSMUST00000218739 1222 ntBASIC10.61□□□□□ -0.71
H3f3cP02301 Gm8227-201ENSMUST00000223306 571 ntBASIC10.61□□□□□ -0.71
H3f3cP02301 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
H3f3cP02301 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
H3f3cP02301 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.61□□□□□ -0.71
H3f3cP02301 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H3f3cP02301 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
H3f3cP02301 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
H3f3cP02301 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
H3f3cP02301 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
H3f3cP02301 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
H3f3cP02301 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms