Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CcnkO88874 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CcnkO88874 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.02□□□□□ -0.64
CcnkO88874 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
CcnkO88874 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CcnkO88874 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
CcnkO88874 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CcnkO88874 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
CcnkO88874 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CcnkO88874 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CcnkO88874 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CcnkO88874 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
CcnkO88874 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CcnkO88874 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
CcnkO88874 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CcnkO88874 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.02□□□□□ -0.65
CcnkO88874 Gm12490-201ENSMUST00000120255 560 ntBASIC11.02□□□□□ -0.65
CcnkO88874 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.02□□□□□ -0.65
CcnkO88874 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CcnkO88874 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CcnkO88874 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CcnkO88874 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.02□□□□□ -0.65
CcnkO88874 Gm6745-201ENSMUST00000199216 526 ntBASIC11.02□□□□□ -0.65
CcnkO88874 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CcnkO88874 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CcnkO88874 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.02□□□□□ -0.65
CcnkO88874 Gm17794-201ENSMUST00000220252 955 ntBASIC11.02□□□□□ -0.65
CcnkO88874 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CcnkO88874 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
CcnkO88874 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CcnkO88874 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
CcnkO88874 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CcnkO88874 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
CcnkO88874 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CcnkO88874 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CcnkO88874 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CcnkO88874 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CcnkO88874 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
CcnkO88874 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
CcnkO88874 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CcnkO88874 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CcnkO88874 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CcnkO88874 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
CcnkO88874 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CcnkO88874 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CcnkO88874 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
CcnkO88874 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
CcnkO88874 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
CcnkO88874 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
CcnkO88874 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CcnkO88874 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CcnkO88874 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CcnkO88874 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CcnkO88874 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CcnkO88874 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.01□□□□□ -0.65
CcnkO88874 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CcnkO88874 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CcnkO88874 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
CcnkO88874 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
CcnkO88874 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
CcnkO88874 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CcnkO88874 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CcnkO88874 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CcnkO88874 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
CcnkO88874 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CcnkO88874 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CcnkO88874 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CcnkO88874 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
CcnkO88874 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
CcnkO88874 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
CcnkO88874 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.01□□□□□ -0.65
CcnkO88874 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
CcnkO88874 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CcnkO88874 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CcnkO88874 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
CcnkO88874 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CcnkO88874 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CcnkO88874 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CcnkO88874 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
CcnkO88874 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.01□□□□□ -0.65
CcnkO88874 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CcnkO88874 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
CcnkO88874 Gm9002-201ENSMUST00000178437 499 ntBASIC11.01□□□□□ -0.65
CcnkO88874 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CcnkO88874 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.01□□□□□ -0.65
CcnkO88874 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CcnkO88874 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CcnkO88874 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.01□□□□□ -0.65
CcnkO88874 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CcnkO88874 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CcnkO88874 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
CcnkO88874 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CcnkO88874 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.01□□□□□ -0.65
CcnkO88874 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
CcnkO88874 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.01□□□□□ -0.65
CcnkO88874 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.01□□□□□ -0.65
CcnkO88874 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
CcnkO88874 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
CcnkO88874 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CcnkO88874 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms