Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ttc3O88196 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ttc3O88196 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Ttc3O88196 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ttc3O88196 Gm23912-201ENSMUST00000104687 87 ntBASIC12.83□□□□□ -0.35
Ttc3O88196 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ttc3O88196 Gm14058-201ENSMUST00000116082 735 ntBASIC12.83□□□□□ -0.35
Ttc3O88196 Gm12208-201ENSMUST00000122004 163 ntBASIC12.83□□□□□ -0.35
Ttc3O88196 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Ttc3O88196 Gm5733-201ENSMUST00000190232 939 ntBASIC12.83□□□□□ -0.35
Ttc3O88196 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Ttc3O88196 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.35
Ttc3O88196 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.83□□□□□ -0.35
Ttc3O88196 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ttc3O88196 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ttc3O88196 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ttc3O88196 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ttc3O88196 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ttc3O88196 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ttc3O88196 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.83□□□□□ -0.36
Ttc3O88196 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ttc3O88196 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ttc3O88196 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ttc3O88196 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ttc3O88196 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ttc3O88196 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ttc3O88196 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ttc3O88196 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ttc3O88196 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ttc3O88196 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.83□□□□□ -0.36
Ttc3O88196 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ttc3O88196 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ttc3O88196 Gm23596-201ENSMUST00000104304 132 ntBASIC12.83□□□□□ -0.36
Ttc3O88196 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ttc3O88196 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ttc3O88196 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ttc3O88196 Gm9062-201ENSMUST00000117712 727 ntBASIC12.83□□□□□ -0.36
Ttc3O88196 Gm11667-201ENSMUST00000119828 486 ntBASIC12.83□□□□□ -0.36
Ttc3O88196 Gm15432-201ENSMUST00000121106 195 ntBASIC12.83□□□□□ -0.36
Ttc3O88196 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ttc3O88196 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.83□□□□□ -0.36
Ttc3O88196 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ttc3O88196 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ttc3O88196 Mir7032-201ENSMUST00000185154 79 ntBASIC12.83□□□□□ -0.36
Ttc3O88196 Gm6905-201ENSMUST00000205729 511 ntBASIC12.83□□□□□ -0.36
Ttc3O88196 Gm4157-201ENSMUST00000211647 679 ntBASIC12.83□□□□□ -0.36
Ttc3O88196 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ttc3O88196 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ttc3O88196 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ttc3O88196 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ttc3O88196 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ttc3O88196 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ttc3O88196 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ttc3O88196 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ttc3O88196 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ttc3O88196 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ttc3O88196 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ttc3O88196 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ttc3O88196 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ttc3O88196 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ttc3O88196 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ttc3O88196 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ttc3O88196 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ttc3O88196 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ttc3O88196 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ttc3O88196 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.82□□□□□ -0.36
Ttc3O88196 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ttc3O88196 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ttc3O88196 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Ttc3O88196 Gm15131-201ENSMUST00000119124 595 ntBASIC12.82□□□□□ -0.36
Ttc3O88196 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ttc3O88196 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Ttc3O88196 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ttc3O88196 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.82□□□□□ -0.36
Ttc3O88196 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.82□□□□□ -0.36
Ttc3O88196 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.82□□□□□ -0.36
Ttc3O88196 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ttc3O88196 Gm10731-201ENSMUST00000181171 448 ntBASIC12.82□□□□□ -0.36
Ttc3O88196 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.82□□□□□ -0.36
Ttc3O88196 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.82□□□□□ -0.36
Ttc3O88196 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.82□□□□□ -0.36
Ttc3O88196 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ttc3O88196 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ttc3O88196 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ttc3O88196 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ttc3O88196 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ttc3O88196 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ttc3O88196 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ttc3O88196 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ttc3O88196 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ttc3O88196 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ttc3O88196 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
Ttc3O88196 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ttc3O88196 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ttc3O88196 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ttc3O88196 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ttc3O88196 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ttc3O88196 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.82□□□□□ -0.36
Ttc3O88196 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.82□□□□□ -0.36
Ttc3O88196 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms