Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim1O70400 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Pdlim1O70400 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim1O70400 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim1O70400 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim1O70400 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pdlim1O70400 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pdlim1O70400 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim1O70400 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.22□□□□□ -0.45
Pdlim1O70400 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim1O70400 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim1O70400 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim1O70400 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim1O70400 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim1O70400 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim1O70400 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pdlim1O70400 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim1O70400 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim1O70400 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim1O70400 Gm23912-201ENSMUST00000104687 87 ntBASIC12.22□□□□□ -0.45
Pdlim1O70400 Gm12015-201ENSMUST00000117065 843 ntBASIC12.22□□□□□ -0.45
Pdlim1O70400 Gm14109-201ENSMUST00000118814 309 ntBASIC12.22□□□□□ -0.45
Pdlim1O70400 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim1O70400 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim1O70400 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.22□□□□□ -0.45
Pdlim1O70400 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim1O70400 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.22□□□□□ -0.45
Pdlim1O70400 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim1O70400 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.22□□□□□ -0.45
Pdlim1O70400 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim1O70400 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim1O70400 Gm9996-201ENSMUST00000070359 913 ntBASIC12.22□□□□□ -0.45
Pdlim1O70400 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim1O70400 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim1O70400 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim1O70400 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim1O70400 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim1O70400 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim1O70400 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim1O70400 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim1O70400 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim1O70400 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim1O70400 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.21□□□□□ -0.45
Pdlim1O70400 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pdlim1O70400 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.21□□□□□ -0.45
Pdlim1O70400 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pdlim1O70400 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.21□□□□□ -0.45
Pdlim1O70400 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pdlim1O70400 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Pdlim1O70400 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Pdlim1O70400 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Pdlim1O70400 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.21□□□□□ -0.45
Pdlim1O70400 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.21□□□□□ -0.45
Pdlim1O70400 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.21□□□□□ -0.45
Pdlim1O70400 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.21□□□□□ -0.45
Pdlim1O70400 Gm27046-201ENSMUST00000182160 463 ntBASIC12.21□□□□□ -0.45
Pdlim1O70400 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.21□□□□□ -0.45
Pdlim1O70400 Gm27320-201ENSMUST00000184892 109 ntBASIC12.21□□□□□ -0.45
Pdlim1O70400 Gm8885-201ENSMUST00000189382 598 ntBASIC12.21□□□□□ -0.45
Pdlim1O70400 Gm37259-201ENSMUST00000193903 849 ntBASIC12.21□□□□□ -0.45
Pdlim1O70400 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.21□□□□□ -0.45
Pdlim1O70400 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.21□□□□□ -0.45
Pdlim1O70400 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.21□□□□□ -0.45
Pdlim1O70400 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pdlim1O70400 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pdlim1O70400 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Pdlim1O70400 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Pdlim1O70400 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pdlim1O70400 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.21□□□□□ -0.45
Pdlim1O70400 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pdlim1O70400 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pdlim1O70400 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pdlim1O70400 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pdlim1O70400 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pdlim1O70400 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Pdlim1O70400 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Pdlim1O70400 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pdlim1O70400 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pdlim1O70400 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Pdlim1O70400 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pdlim1O70400 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pdlim1O70400 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pdlim1O70400 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pdlim1O70400 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Pdlim1O70400 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pdlim1O70400 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pdlim1O70400 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim1O70400 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pdlim1O70400 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Pdlim1O70400 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim1O70400 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.2□□□□□ -0.46
Pdlim1O70400 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim1O70400 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim1O70400 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim1O70400 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim1O70400 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim1O70400 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim1O70400 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim1O70400 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim1O70400 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms